RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 OSCP1Q8WVF1 389 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 KCTD4Q8WVF5 259 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 RMND5BQ96G75 393 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TBCDQ9BTW9 1192 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TMEM191CA6NGB0 347 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ALDH1A2O94788 518 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 IGSF6O95976 241 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 TMED10P49755 219 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ANXA11P50995 505 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 SAMD4BQ5PRF9 694 aaKnown RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 SDHAF4Q5VUM1 108 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 ZNF184Q99676 751 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-201ENST00000351677 B3GNT5Q9BYG0 378 aa16.24■□□□□ 0.19
PTPN11-201ENST00000351677 PSMD12O00232 456 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 GRK3P35626 688 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 MRPS6P82932 125 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 MFSD4BQ5TF39 518 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ZFP1Q6P2D0 407 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 USP50Q70EL3 339 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PRDM16Q9HAZ2 1276 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PAPSS1O43252 624 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 LYPLA2O95372 231 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ERCC2P18074 760 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ARF4P18085 180 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 VCLP18206 1134 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 MSLNQ13421 630 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 NRF1Q16656 503 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PTPN20Q4JDL3 420 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 FAM228AQ86W67 206 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ENTPD5O75356 428 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ITGA2BP08514 1039 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 OR56A5P0C7T3 313 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PSMB9P28065 219 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 RPS7P62081 194 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 NEDD8Q15843 81 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ALYREFQ86V81 257 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 TDRKHQ9Y2W6 561 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 ALOX15BO15296 676 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PEX1O43933 1283 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 HS6ST1O60243 411 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 IL2P60568 153 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.23■□□□□ 0.198e-6■■■□□ 18.6
PTPN11-201ENST00000351677 MPP6Q9NZW5 540 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 IFNA14P01570 189 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 MAXP61244 160 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 CYP4Z1Q86W10 505 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 PAPOLBQ9NRJ5 636 aaKnown RBP16.23■□□□□ 0.19
PTPN11-201ENST00000351677 SLC17A7Q9P2U7 560 aa16.23■□□□□ 0.19
PTPN11-201ENST00000351677 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 MTA1Q13330 715 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 ACOX1Q15067 660 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 HSDL1Q3SXM5 330 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 EID3Q8N140 333 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 NXF3Q9H4D5 531 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PRR23D1E9PI22 279 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PRR23D2P0DMB1 279 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 ATP5C1P36542 298 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 CACUL1Q86Y37 369 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PTGR2Q8N8N7 351 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 LENG9Q96B70 501 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 MPP4Q96JB8 637 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 BPIFA1Q9NP55 256 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 DDX18Q9NVP1 670 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 OPTCQ9UBM4 332 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 ZMYM2Q9UBW7 1377 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 LYPLA1O75608 230 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 CST3P01034 146 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 GSNP06396 782 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PIRTP0C851 137 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 TYMPP19971 482 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 NEK3P51956 506 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 CTBP1Q13363 440 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 MCOLN3Q8TDD5 553 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 TADA1Q96BN2 335 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PAWRQ96IZ0 340 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 FAM20BO75063 409 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 VPS4BO75351 444 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 MATKP42679 507 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 TRABD2AQ86V40 505 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 DCUN1D5Q9BTE7 237 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 LRRC4CQ9HCJ2 640 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 ZNF839A8K0R7 811 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 IFRD1O00458 451 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 KRT36O76013 467 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 TNFAIP8O95379 198 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 TSHRP16473 764 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 MRPS5P82675 430 aaKnown RBP16.22■□□□□ 0.19
PTPN11-201ENST00000351677 CPXM1Q96SM3 734 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 PCDH18Q9HCL0 1135 aa16.22■□□□□ 0.19
PTPN11-201ENST00000351677 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.19
PTPN11-201ENST00000351677 COX4I1P13073 169 aa16.21■□□□□ 0.19
PTPN11-201ENST00000351677 MAPK10P53779 464 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms