RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PDPK2PQ6A1A2 396 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 PARP9Q8IXQ6 854 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 CRIPAKQ8N1N5 446 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 SPATA22Q8NHS9 363 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 SAR1AQ9NR31 198 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 ZFP69BQ9UJL9 534 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 IGLV3-10A0A075B6K4 115 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 TIMM44O43615 452 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MGRN1O60291 552 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 PLIN3O60664 434 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MPOP05164 745 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 HLA-DQB2P05538 268 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 DLDP09622 509 aaKnown RBP16.99■□□□□ 0.31
SAMM50-201ENST00000350028 NMBRP28336 390 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 HADHAP40939 763 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 OCRLQ01968 901 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 TAF10Q12962 218 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 STX3Q13277 289 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MPP3Q13368 585 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 HSP90AA5PQ58FG0 334 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 ARMC3Q5W041 872 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 POTEHQ6S545 545 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 DCLK2Q8N568 766 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 SH3TC2Q8TF17 1288 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 PTCD2Q8WV60 388 aaKnown RBP16.99■□□□□ 0.31
SAMM50-201ENST00000350028 B3GALT6Q96L58 329 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 FICDQ9BVA6 458 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 TMEM120AQ9BXJ8 343 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 NOL6Q9H6R4 1146 aaKnown RBP16.99■□□□□ 0.31
SAMM50-201ENST00000350028 KCNK13Q9HB14 408 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 IL1RAPL1Q9NZN1 696 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 MARCH2Q9P0N8 246 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 EMCNQ9ULC0 261 aa16.99■□□□□ 0.31
SAMM50-201ENST00000350028 NYNRINQ9P2P1 1898 aaKnown RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 FNDC1Q4ZHG4 1894 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 A0A0G2JND7 137 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 TBKBP1A7MCY6 615 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 DNAJC6O75061 913 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 SNNO75324 88 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 MT-CYBP00156 380 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 ADRA1AP35348 466 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 RENBPP51606 427 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 KPNA1P52294 538 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 RING1Q06587 406 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 HNRNPDQ14103 355 aaKnown RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 FASTKD1Q53R41 847 aaKnown RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 C10orf120Q5SQS8 335 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 CRLF3Q8IUI8 442 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 IPMKQ8NFU5 416 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 INPP5DQ92835 1189 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 SEPT5Q99719 369 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 TTPALQ9BTX7 342 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 MRM3Q9HC36 420 aaKnown RBP16.98■□□□□ 0.31
SAMM50-201ENST00000350028 SNX15Q9NRS6 342 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 KCNK4Q9NYG8 393 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 HEY2Q9UBP5 337 aa16.98■□□□□ 0.31
SAMM50-201ENST00000350028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 SLC12A8A0AV02 714 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 DRGXA6NNA5 263 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 HNRNPCL1O60812 293 aaKnown RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 SOAT2O75908 522 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 PARNO95453 639 aaKnown RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 VNN2O95498 520 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 IGLV3-27P01718 113 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 PROCP04070 461 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 RASSF2P50749 326 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 KCNJ2P63252 427 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 PSMD5Q16401 504 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 TCTN1Q2MV58 587 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 CCDC153Q494R4 210 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 TAF1BQ53T94 588 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 RTP2Q5QGT7 225 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 DENND5AQ6IQ26 1287 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 C16orf46Q6P387 395 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 MTDHQ86UE4 582 aaKnown RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 PPHLN1Q8NEY8 458 aaKnown RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 PPP1R14CQ8TAE6 165 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 CEP295NLQ96MC4 621 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 AGAP2Q99490 1192 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 SLC25A51Q9H1U9 297 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 IARS2Q9NSE4 1012 aaKnown RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 THAP1Q9NVV9 213 aa16.97■□□□□ 0.31
SAMM50-201ENST00000350028 MAGED2Q9UNF1 606 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-201ENST00000350028 TBX18O95935 607 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 GSRP00390 522 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 ZDHHC11BP0C7U3 371 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 RIPK1Q13546 671 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 FSTL4Q6MZW2 842 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 CLNKQ7Z7G1 428 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 DOCK4Q8N1I0 1966 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 RAB3IPQ96QF0 476 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms