RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MT-CO1P00395 513 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 IFNB1P01574 187 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 BMP1P13497 986 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 ETFBP38117 255 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 IFI35P80217 286 aaPredicted RBP19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 SLC7A5Q01650 507 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 ZNF33AQ06730 810 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 SLC10A7Q0GE19 358 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 TDGQ13569 410 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 TEX35Q5T0J7 233 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 MBLAC2Q68D91 279 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 TXNDC11Q6PKC3 985 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 ZNF567Q8N184 647 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 CNTD1Q8N815 330 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 CCDC110Q8TBZ0 833 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 SORCS1Q8WY21 1168 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 IL12RB2Q99665 862 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 TRPV5Q9NQA5 729 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 HEBP1Q9NRV9 189 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 PRKAG3Q9UGI9 489 aa19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 V9GYY5 206 aaPredicted RBP19.38■□□□□ 0.69
CHMP4A-201ENST00000347519 MYO18AQ92614 2054 aaKnown RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 CFAP69A5D8W1 941 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 K7ERQ8 282 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 KRT14P02533 472 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 CCNB1P14635 433 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 RPL22P35268 128 aaKnown RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 STK19P49842 368 aaPredicted RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 DHX34Q14147 1143 aaKnown RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 CYTH1Q15438 398 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 TIGD7Q6NT04 549 aaPredicted RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 GSTA5Q7RTV2 222 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 PGBD5Q8N414 524 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 ZNF557Q8N988 423 aaPredicted RBP19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 FATE1Q969F0 183 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
CHMP4A-201ENST00000347519 C5orf60A6NFR6 353 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 ZSCAN5CA6NGD5 496 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 SHISA7A6NL88 538 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 SPECC1L-ADORA2AF8WAN1 911 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 STIP1P31948 543 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 CTHP32929 405 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 VPS41P49754 854 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 GALK1P51570 392 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 DMC1Q14565 340 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 C8orf74Q6P047 294 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 AHI1Q8N157 1196 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 TAB3Q8N5C8 712 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 TEX26Q8N6G2 289 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 CCDC26Q8TAB7 109 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 GRK7Q8WTQ7 553 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 CYB5D2Q8WUJ1 264 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 DNASE1L2Q92874 299 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 TTC17Q96AE7 1141 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 RPL10LQ96L21 214 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 RUNDC3BQ96NL0 473 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 PNKPQ96T60 521 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 C2orf49Q9BVC5 232 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 SLC2A4RGQ9NR83 387 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 RBM22Q9NW64 420 aaKnown RBP eCLIP19.36■□□□□ 0.696e-7■□□□□ 8.2
CHMP4A-201ENST00000347519 UBA2Q9UBT2 640 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 DMGDHQ9UI17 866 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 HPCAL4Q9UM19 191 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 MUC3AQ02505 3323 aa19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 MUC22E2RYF6 1773 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-201ENST00000347519 A0A0A0MRY4 1105 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 F5H423 210 aaPredicted RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 MUSKO15146 869 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 ZBTB24O43167 697 aaPredicted RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 SMAD6O43541 496 aaKnown RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 GCATO75600 419 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 HLA-DQB2P05538 268 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 RHOXF2BP0C7M4 288 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 SRFP11831 508 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 CD68P34810 354 aaPredicted RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 EIF2DP41214 584 aaKnown RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 LMNB2Q03252 620 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 PTK6Q13882 451 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 LBRQ14739 615 aaKnown RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 NAA30Q147X3 362 aaPredicted RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 TRADDQ15628 312 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 TEX44Q53QW1 395 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 ANKRD20A2Q5SQ80 823 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 TMCO4Q5TGY1 634 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 ANKRD20A1Q5TYW2 823 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 ANKRD20A3Q5VUR7 823 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 TERB1Q8NA31 727 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 WFIKKN2Q8TEU8 576 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 EZH1Q92800 747 aaPredicted RBP19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 MRGPRX3Q96LB0 322 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 SPATA13Q96N96 652 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 AGAP3Q96P47 875 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 RHOXF2Q9BQY4 288 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 PCDH9Q9HC56 1237 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 HCN2Q9UL51 889 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 PIAS3Q9Y6X2 628 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 TTC28Q96AY4 2481 aa19.35■□□□□ 0.69
CHMP4A-201ENST00000347519 FAM187AA6NFU0 413 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 EFCAB8A8MWE9 144 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms