RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 RNASEH2BQ5TBB1 312 aaKnown RBP20.4■□□□□ 0.86
SOX12-201ENST00000342665 SNX15Q9NRS6 342 aa20.4■□□□□ 0.86
SOX12-201ENST00000342665 LGALS13Q9UHV8 139 aa20.4■□□□□ 0.86
SOX12-201ENST00000342665 SMIM28A0A1B0GU29 152 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 SMIM35A0A1B0GVV1 85 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 LZTS3O60299 673 aaPredicted RBP20.39■□□□□ 0.86
SOX12-201ENST00000342665 TNFAIP8O95379 198 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 LDLRP01130 860 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 ATP5C1P36542 298 aaKnown RBP20.39■□□□□ 0.86
SOX12-201ENST00000342665 GRIA4P48058 902 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 MRPS22P82650 360 aaKnown RBP20.39■□□□□ 0.86
SOX12-201ENST00000342665 GBE1Q04446 702 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 LACTB2Q53H82 288 aaPredicted RBP20.39■□□□□ 0.86
SOX12-201ENST00000342665 CYP2R1Q6VVX0 501 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 SLC41A1Q8IVJ1 513 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 OTULINQ96BN8 352 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 PLEKHA8Q96JA3 519 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 SEPHS2Q99611 448 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.39■□□□□ 0.863e-13■□□□□ 11.2
SOX12-201ENST00000342665 BTBD7Q9P203 1132 aa20.39■□□□□ 0.86
SOX12-201ENST00000342665 PNMA8BQ9ULN7 279 aaPredicted RBP20.39■□□□□ 0.86
SOX12-201ENST00000342665 RGSL1A5PLK6 1076 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 CABYRO75952 493 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 BPGMP07738 259 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 CD86P42081 329 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 SLC1A5Q15758 541 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 CCDC81Q6ZN84 652 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 SLC26A9Q7LBE3 791 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 TFAP2BQ92481 460 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 ALG9Q9H6U8 611 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 CATSPERZQ9NTU4 200 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 SYBUQ9NX95 663 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 GIT1Q9Y2X7 761 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 BCLAF3A2AJT9 711 aaKnown RBP20.39■□□□□ 0.85
SOX12-201ENST00000342665 TTLL13PA6NNM8 815 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 GUCA1CO95843 209 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 NEK2P51955 445 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 IL2P60568 153 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 ZYG11BQ9C0D3 744 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 RABGEF1Q9UJ41 708 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 FAM50BQ9Y247 325 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 COX4I1P13073 169 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 LBPP18428 481 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 FMO4P31512 558 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 RAB10P61026 200 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 STK40Q8N2I9 435 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 RDH11Q8TC12 318 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 PIF1Q9H611 641 aa20.39■□□□□ 0.85
SOX12-201ENST00000342665 ZNF214Q9UL59 606 aaPredicted RBP20.39■□□□□ 0.85
SOX12-201ENST00000342665 KATNA1O75449 491 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 ITGB6P18564 788 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 PSEN1P49768 467 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 INHBEP58166 350 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 NMD3Q96D46 503 aaKnown RBP20.38■□□□□ 0.85
SOX12-201ENST00000342665 MECRQ9BV79 373 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 PLLPQ9Y342 182 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 SNUPNO95149 360 aaKnown RBP20.38■□□□□ 0.85
SOX12-201ENST00000342665 ADGRD1Q6QNK2 874 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 MILR1Q7Z6M3 343 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 KCTD4Q8WVF5 259 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 MRPL57Q9BQC6 102 aaKnown RBP20.38■□□□□ 0.85
SOX12-201ENST00000342665 FAM105AQ9NUU6 356 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 CCDC154A6NI56 674 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 PGS1Q32NB8 556 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 GPSM1Q86YR5 675 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 PCDH20Q8N6Y1 951 aaKnown RBP20.38■□□□□ 0.85
SOX12-201ENST00000342665 UCMAQ8WVF2 138 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 FAXDC2Q96IV6 333 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 HGH1Q9BTY7 390 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 RPTORQ8N122 1335 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 TFEBP19484 476 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 HLA-DPA1P20036 260 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 RAP1GDS1P52306 607 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 FASTKD3Q14CZ7 662 aaKnown RBP20.38■□□□□ 0.85
SOX12-201ENST00000342665 RAP1GAP2Q684P5 730 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 CLNKQ7Z7G1 428 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 TDRPQ86YL5 185 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 TMCO5AQ8N6Q1 288 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 GIMAP4Q9NUV9 329 aa20.38■□□□□ 0.85
SOX12-201ENST00000342665 MDM4O15151 490 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 CLOCKO15516 846 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 KDM1AO60341 852 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 KRT36O76013 467 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 ALOX15P16050 662 aaPredicted RBP20.37■□□□□ 0.85
SOX12-201ENST00000342665 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
SOX12-201ENST00000342665 PFKFB4Q16877 469 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 BRMS1LQ5PSV4 323 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 FAM45BPQ6NSW5 357 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 NKAPQ8N5F7 415 aaKnown RBP20.37■□□□□ 0.85
SOX12-201ENST00000342665 FAM45AQ8TCE6 357 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 RMND5BQ96G75 393 aaPredicted RBP20.37■□□□□ 0.85
SOX12-201ENST00000342665 YME1L1Q96TA2 773 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 PDZD7Q9H5P4 517 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 COPS7BQ9H9Q2 264 aaPredicted RBP20.37■□□□□ 0.85
SOX12-201ENST00000342665 ZNF682O95780 498 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 ARMC12Q5T9G4 340 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 CIPCQ9C0C6 399 aa20.37■□□□□ 0.85
SOX12-201ENST00000342665 GNG14A0A1W2PPG7 69 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms