RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CCL26Q9Y258 94 aa17.7■□□□□ 0.42
CLDN4-201ENST00000340958 OBSL1O75147 1896 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 J3KR12 359 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 EIF3HO15372 352 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 LINC01565O15544 149 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 GREM1O60565 184 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 TTC4O95801 387 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 CEBPBP17676 345 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 ACVRL1P37023 503 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 OXCT1P55809 520 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 IL10RBQ08334 325 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 COL19A1Q14993 1142 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 DNAJC21Q5F1R6 531 aaKnown RBP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 LRIG3Q6UXM1 1119 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 USP13Q92995 863 aaPredicted RBP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 HLA-CQ95604 372 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 SERPINB12Q96P63 405 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 CENPHQ9H3R5 247 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 FAM53CQ9NYF3 392 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 NINJ2Q9NZG7 142 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
CLDN4-201ENST00000340958 C5orf42Q9H799 3197 aa17.69■□□□□ 0.42
CLDN4-201ENST00000340958 A0A0D9SEW6 157 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 E2F8A0AVK6 867 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 ILVBLA1L0T0 632 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 ETFBP38117 255 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MAGEA6P43360 314 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 EIF3BP55884 814 aaKnown RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 CDK16Q00536 496 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MPPE1Q53F39 396 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 RNF219Q5W0B1 726 aaPredicted RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 LEKR1Q6ZMV7 388 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 CAPN12Q6ZSI9 719 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 EP400NLQ6ZTU2 488 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 RELL1Q8IUW5 271 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MFN1Q8IWA4 741 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 PALM2Q8IXS6 379 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MCUQ8NE86 351 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 OR7D4Q8NG98 312 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 ITFG1Q8TB96 612 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 VPS37BQ9H9H4 285 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 ATP13A1Q9HD20 1204 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 EIF2B3Q9NR50 452 aaKnown RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 HAUS2Q9NVX0 235 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 CLDND1Q9NY35 253 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 AVILO75366 819 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 BANF1O75531 89 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 CD68P34810 354 aaPredicted RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MMP13P45452 471 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 HNRNPDQ14103 355 aaKnown RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 CTC1Q2NKJ3 1217 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 OTOP3Q7RTS5 596 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 KRT222Q8N1A0 295 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 BBS5Q8N3I7 341 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 VN1R2Q8NFZ6 395 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 PPP1R2P1Q96PQ5 205 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 XAB2Q9HCS7 855 aaKnown RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 NT5MQ9NPB1 228 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 MED4Q9NPJ6 270 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 UBP1Q9NZI7 540 aa17.68■□□□□ 0.42
CLDN4-201ENST00000340958 AAR2Q9Y312 384 aaKnown RBP17.68■□□□□ 0.42
CLDN4-201ENST00000340958 SHROOM3Q8TF72 1996 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.67■□□□□ 0.42
CLDN4-201ENST00000340958 CBX4O00257 560 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 ALOX15BO15296 676 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 LUC7L3O95232 432 aaKnown RBP17.67■□□□□ 0.42
CLDN4-201ENST00000340958 LTBRP36941 435 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 SPARCL1Q14515 664 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 ZNF235Q14590 738 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 FASTKD3Q14CZ7 662 aaKnown RBP17.67■□□□□ 0.42
CLDN4-201ENST00000340958 ARID3BQ8IVW6 561 aaPredicted RBP17.67■□□□□ 0.42
CLDN4-201ENST00000340958 FAM217AQ8IXS0 508 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 CPXM2Q8N436 756 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 EFHBQ8N7U6 833 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 CNTD1Q8N815 330 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 FBXO36Q8NEA4 188 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 ZSCAN18Q8TBC5 510 aaPredicted RBP17.67■□□□□ 0.42
CLDN4-201ENST00000340958 MAML1Q92585 1016 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 ZSWIM3Q96MP5 696 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 CCDC77Q9BR77 488 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 PHACTR1Q9C0D0 580 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 GLOD4Q9HC38 313 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 TBC1D30Q9Y2I9 924 aa17.67■□□□□ 0.42
CLDN4-201ENST00000340958 DOCK4Q8N1I0 1966 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 ERI2A8K979 691 aaKnown RBP17.66■□□□□ 0.42
CLDN4-201ENST00000340958 PSMD3O43242 534 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 PRAMEF11O60813 436 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 ANXA9O76027 345 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 PRAMEF12O95522 483 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 GLP2RO95838 553 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 CPP00450 1065 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 HLA-DQB2P05538 268 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 MYZAPP0CAP1 466 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 KCNA5P22460 613 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 FSHRP23945 695 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 PHBP35232 272 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms