RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GSDMDP57764 484 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 KRT81Q14533 505 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 PARP15Q460N3 678 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 ZNF776Q68DI1 518 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 METTL3Q86U44 580 aaKnown RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 ALYREFQ86V81 257 aaKnown RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 C11orf74Q86VG3 221 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 MMAAQ8IVH4 418 aaKnown RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 TSC1Q92574 1164 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 CSPG4P5Q96PW8 444 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 FAM129BQ96TA1 746 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 KLC2Q9H0B6 622 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 DUSP15Q9H1R2 295 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 LRRC19Q9H756 370 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 ITM2CQ9NQX7 267 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 KLHL11Q9NVR0 708 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 CFAP54Q96N23 3096 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 PI4KAP42356 2102 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 MAP3K13O43283 966 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 BNIP3LO60238 219 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 RNASEH1O60930 286 aaKnown RBP15.57■□□□□ 0.08
UBE3B-201ENST00000340074 CD160O95971 181 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 KRT7P08729 469 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 AMPD1P23109 780 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 IL4RP24394 825 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 ARSEP51690 589 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 CLCN6P51797 869 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 HADHBP55084 474 aaKnown RBP15.57■□□□□ 0.08
UBE3B-201ENST00000340074 SLC20A2Q08357 652 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 MMRN1Q13201 1228 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 ELAVL3Q14576 367 aaKnown RBP15.57■□□□□ 0.08
UBE3B-201ENST00000340074 LAIR1Q6GTX8 287 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 NPWQ8N729 165 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 NETO2Q8NC67 525 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 KCTD6Q8NC69 237 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 FAM71BQ8TC56 605 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 SLC39A8Q9C0K1 460 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 SALL4Q9UJQ4 1053 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 MFHAS1Q9Y4C4 1052 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 HYOU1Q9Y4L1 999 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 GPR179Q6PRD1 2367 aa15.57■□□□□ 0.08
UBE3B-201ENST00000340074 RIF1Q5UIP0 2472 aaKnown RBP15.57■□□□□ 0.08
UBE3B-201ENST00000340074 DOCK9Q9BZ29 2069 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 FAM186AA6NE01 2351 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 A0A0A6YYK5 440 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-201ENST00000340074 BUB1BO60566 1050 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-201ENST00000340074 ZNF821O75541 412 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-201ENST00000340074 DNTTP04053 509 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 RPL6Q02878 288 aaKnown RBP15.56■□□□□ 0.08
UBE3B-201ENST00000340074 SERINC3Q13530 473 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 DPYSL3Q14195 570 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 ELF2Q15723 593 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 ZFYVE27Q5T4F4 411 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 AFMIDQ63HM1 303 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 PMS2CLQ68D20 193 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 C22orf39Q6P5X5 142 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 CALN1Q9BXU9 219 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 TNKS2Q9H2K2 1166 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 ETNK2Q9NVF9 386 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 FCF1Q9Y324 198 aaKnown RBP15.56■□□□□ 0.08
UBE3B-201ENST00000340074 DUSP10Q9Y6W6 482 aa15.56■□□□□ 0.08
UBE3B-201ENST00000340074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 CXorf51AA0A1B0GTR3 108 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 MCF2LO15068 1137 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 MID1O15344 667 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 BUB1O43683 1085 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 RHOBTB1O94844 696 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 IL1BP01584 269 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 IGLV3-19P01714 112 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 COMTP21964 271 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 CD6P30203 668 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 SLC1A1P43005 524 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 PSMD8P48556 350 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 VAV2P52735 878 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 GEMIN4P57678 1058 aaKnown RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 ZBTB16Q05516 673 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 PDK2Q15119 407 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 CST6Q15828 149 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 TTC31Q49AM3 519 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 TMCO3Q6UWJ1 677 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 SLC36A4Q6YBV0 504 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 KIAA1328Q86T90 577 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 FAM124AQ86V42 546 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 ARHGAP12Q8IWW6 846 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 TMEFF1Q8IYR6 380 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 DEFB119Q8N690 84 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 OR2A12Q8NGT7 310 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 OR8D1Q8WZ84 308 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 TOE1Q96GM8 510 aaKnown RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 DESI2Q9BSY9 194 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 LACRTQ9GZZ8 138 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 PABPC3Q9H361 631 aaKnown RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
UBE3B-201ENST00000340074 RCOR3Q9P2K3 495 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-201ENST00000340074 NCDNQ9UBB6 729 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms