RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 GBP7Q8N8V2 638 aaPredicted RBP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 TGS1Q96RS0 853 aaKnown RBP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 YY1AP1Q9H869 796 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 RBM22Q9NW64 420 aaKnown RBP eCLIP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SSX2IPQ9Y2D8 614 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 ARL2BPQ9Y2Y0 163 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 ERI2A8K979 691 aaKnown RBP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 CXorf49A8MYA2 514 aaPredicted RBP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 PEX11BO96011 259 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 F11P03951 625 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 PRKCHP24723 683 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 PPP3CCP48454 512 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 CREMQ03060 361 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 WLSQ5T9L3 541 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 TRMT10BQ6PF06 316 aaKnown RBP20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SPATA22Q8NHS9 363 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 GSDMBQ8TAX9 411 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SLC44A1Q8WWI5 657 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 RAD9AQ99638 391 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 PLCD4Q9BRC7 762 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 GLOD4Q9HC38 313 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SMYD2Q9NRG4 433 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SYBUQ9NX95 663 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 NKIRAS1Q9NYS0 192 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 A0A1W2PPM1 405 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 F5H5T6 163 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 J3KR12 359 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 SLC11A2P49281 568 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 PRPSAP1Q14558 356 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 C5orf22Q49AR2 442 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 PREPLQ4J6C6 727 aaPredicted RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLHDC8BQ8IXV7 354 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 WBP2Q969T9 261 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 PLD4Q96BZ4 506 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLF16Q9BXK1 252 aaPredicted RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 KIF9Q9HAQ2 790 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 IL21Q9HBE4 155 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 PLXNA4Q9HCM2 1894 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 CASS4Q9NQ75 786 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 UXTQ9UBK9 157 aaPredicted RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 HLA-DQB2P05538 268 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 SYN1P17600 705 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 OR1E1P30953 314 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 CGB2Q6NT52 195 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 PSRC1Q6PGN9 363 aaPredicted RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 LILRA6Q6PI73 481 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 FCRL5Q96RD9 977 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 CYP2S1Q96SQ9 504 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 APOL2Q9BQE5 337 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 ALG13Q9NP73 1137 aaKnown RBP20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 SLC4A7Q9Y6M7 1214 aa20.65■□□□□ 0.9
RIPPLY3-201ENST00000329553 MT-CYBP00156 380 aaPredicted RBP20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 CORO1AP31146 461 aaKnown RBP20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 ERVFC1P60507 584 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 NCALDP61601 193 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 BNIP1Q12981 228 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 STEAP4Q687X5 459 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 CTAGE3PQ8IX95 158 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 PPM1NQ8N819 430 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 SP7Q8TDD2 431 aaPredicted RBP20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 KLHL5Q96PQ7 755 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 TRABDQ9H4I3 376 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 MOCS1Q9NZB8 636 aa20.64■□□□□ 0.89
RIPPLY3-201ENST00000329553 FAM47DPA6NHR8 397 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 TLL1O43897 1013 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 RAMP2O60895 175 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 ATP6V1G2O95670 118 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 IRF1P10914 325 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 POLD3Q15054 466 aaPredicted RBP20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 ANO4Q32M45 955 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 ITIH5Q86UX2 942 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 DNAAF3Q8N9W5 541 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 MZB1Q8WU39 189 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 HERVK_113Q902F9 699 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 SLC22A12Q96S37 553 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 LRRC40Q9H9A6 602 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 GGT7Q9UJ14 662 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 FAM155BO75949 473 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 CSPG5O95196 566 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 TAC1P20366 129 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 MAPKAPK2P49137 400 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 RIPK1Q13546 671 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 HNRNPDQ14103 355 aaKnown RBP20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 LRRC6Q86X45 466 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 UNC5BQ8IZJ1 945 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 AZIN2Q96A70 460 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 GRAMD1AQ96CP6 724 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 SMPD4Q9NXE4 827 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 AGO1Q9UL18 857 aaKnown RBP20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 AAR2Q9Y312 384 aaKnown RBP20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 IKBKGQ9Y6K9 419 aa20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 ZFP37Q9Y6Q3 630 aaPredicted RBP20.63■□□□□ 0.89
RIPPLY3-201ENST00000329553 INHBAP08476 426 aa20.62■□□□□ 0.89
RIPPLY3-201ENST00000329553 PGAM1P18669 254 aa20.62■□□□□ 0.89
RIPPLY3-201ENST00000329553 FOXN2P32314 431 aa20.62■□□□□ 0.89
RIPPLY3-201ENST00000329553 BMPR1AP36894 532 aa20.62■□□□□ 0.89
RIPPLY3-201ENST00000329553 ACVRL1P37023 503 aa20.62■□□□□ 0.89
RIPPLY3-201ENST00000329553 SLC18A1P54219 525 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms