RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 PHF13Q86YI8 300 aaPredicted RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 RTL3Q8N8U3 475 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 CYP4F12Q9HCS2 524 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 LZTS1Q9Y250 596 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ADORA2AP29274 412 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PSMC6P62333 389 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 TNK2Q07912 1038 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 OVGP1Q12889 678 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 MACC1Q6ZN28 852 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 EXOC3L1Q86VI1 746 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 CAMK1DQ8IU85 385 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 DEFB107AQ8IZN7 70 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 DHRSXQ8N5I4 330 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ITFG1Q8TB96 612 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 CD101Q93033 1021 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ANAPC2Q9UJX6 822 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 TSC22D4Q9Y3Q8 395 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ROBO3Q96MS0 1386 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PLEKP08567 350 aaPredicted RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 SPIRE1Q08AE8 756 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 DPYSL3Q14195 570 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 INTS7Q9NVH2 962 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 MARCH2Q9P0N8 246 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 RWDD3Q9Y3V2 267 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 LGALS2P05162 132 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ITGAVP06756 1048 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 NPR3P17342 541 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 KDELR1P24390 212 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 GLRBP48167 497 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 MZT2BQ6NZ67 158 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 C12orf56Q8IXR9 622 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 PTCD2Q8WV60 388 aaKnown RBP13.51□□□□□ -0.25
TRAK1-201ENST00000327628 HGH1Q9BTY7 390 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ZYG11BQ9C0D3 744 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 ETNK2Q9NVF9 386 aa13.51□□□□□ -0.25
TRAK1-201ENST00000327628 BBIP1A8MTZ0 92 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PEX1O43933 1283 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 HIST1H2ABP04908 130 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PTPN1P18031 435 aaKnown RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MGAT1P26572 445 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 RGS1Q08116 209 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 TTC27Q6P3X3 843 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 FBXL19Q6PCT2 694 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 HIST3H2AQ7L7L0 130 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MDM1Q8TC05 714 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 HIST1H2ACQ93077 130 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MED8Q96G25 268 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 SPRTNQ9H040 489 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 POLR1DQ9Y2S0 133 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 FCHO1O14526 889 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 CLOCKO15516 846 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 TGFBR2P37173 567 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 RIPOR1Q6ZS17 1223 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MREGQ8N565 214 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 CENPIQ92674 756 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 FAXDC2Q96IV6 333 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PNMA5Q96PV4 448 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 SLC38A2Q96QD8 506 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 EFCAB10A6NFE3 127 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 NDUFB5O43674 189 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 LYPLA2O95372 231 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 POU1F1P28069 291 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 CDC25CP30307 473 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 THOP1P52888 689 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PNLIPRP1P54315 467 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 POU6F1Q14863 301 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 RFTN2Q52LD8 501 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 NET1Q7Z628 596 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 YTHDF3Q7Z739 585 aaKnown RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 KIAA0895Q8NCT3 520 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 NELL1Q92832 810 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 MYDGFQ969H8 173 aa13.5□□□□□ -0.25
TRAK1-201ENST00000327628 ACSF2Q96CM8 615 aaPredicted RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 PTCD3Q96EY7 689 aaKnown RBP13.5□□□□□ -0.25
TRAK1-201ENST00000327628 CATSPER2Q96P56 530 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms