RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
CCDC60-201ENST00000327554 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
CCDC60-201ENST00000327554 MORF4L1Q9UBU8 362 aa13□□□□□ -0.33
CCDC60-201ENST00000327554 ADAM28Q9UKQ2 775 aa13□□□□□ -0.33
CCDC60-201ENST00000327554 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 A0A096LPK6 155 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CCDC162PA2VCL2 907 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 PRORSD1PA6NEY8 169 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 MICAL2O94851 1124 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 EPHX2P34913 555 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 RALGDSQ12967 914 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 GRM1Q13255 1194 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 MAP7D1Q3KQU3 841 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 C6orf10Q5SRN2 563 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 QKIQ96PU8 341 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 APBA2Q99767 749 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SNRNP25Q9BV90 132 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 EIF2AQ9BY44 585 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 NMRAL1Q9HBL8 299 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 RIC8BQ9NVN3 520 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 GID8Q9NWU2 228 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SYBUQ9NX95 663 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 TXNDC16Q9P2K2 825 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 B3GNT3Q9Y2A9 372 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SLC30A1Q9Y6M5 507 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CNOT3O75175 753 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 GPD2P43304 727 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 NAMPTP43490 491 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 GRIA4P48058 902 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 NME5P56597 212 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 BOLA3Q53S33 107 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 FSTL4Q6MZW2 842 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SCYL2Q6P3W7 929 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 KCNT2Q6UVM3 1135 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CERS2Q96G23 380 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 RMDN3Q96TC7 470 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 ADI1Q9BV57 179 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CAB39LQ9H9S4 337 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 POLR1BQ9H9Y6 1135 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 NXF1Q9UBU9 619 aaKnown RBP12.99□□□□□ -0.33
CCDC60-201ENST00000327554 HESX1Q9UBX0 185 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 HMGXB4Q9UGU5 601 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 SARDHQ9UL12 918 aa12.99□□□□□ -0.33
CCDC60-201ENST00000327554 HEATR9A2RTY3 570 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 KRBA1A5PL33 1030 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 SAC3D1A6NKF1 404 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 SPTLC1O15269 473 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 AQP9O43315 295 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 GRAP2O75791 330 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 SBK3P0C264 359 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 ZNF182P17025 639 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CYP2F1P24903 491 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 LIMK2P53671 638 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CDH8P55286 799 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 TNK2Q07912 1038 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PRKAA1Q13131 559 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 LRP8Q14114 963 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CCDC14Q49A88 953 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 GLRA4Q5JXX5 417 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 DACT2Q5SW24 774 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 IRAK1BP1Q5VVH5 260 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 FAM117BQ6P1L5 589 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 LSMEM2Q8N112 164 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PCYOX1LQ8NBM8 494 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 HMGCLL1Q8TB92 370 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 FCRL3Q96P31 734 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PGLYRP2Q96PD5 576 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 TCF12Q99081 682 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PORCNQ9H237 461 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 MRPL40Q9NQ50 206 aaKnown RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 VTI1BQ9UEU0 232 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 SFMBT1Q9UHJ3 866 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 ZNF839A8K0R7 811 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 M0QYV0 167 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 SEC24DO94855 1032 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 MPOP05164 745 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PSAPP07602 524 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms