RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MCOLN2Q8IZK6 566 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 GIPC3Q8TF64 312 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 PRDM16Q9HAZ2 1276 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 FAM153BP0C7A2 387 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 FAM153CQ494X1 144 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 TMC7Q7Z402 723 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 RXFP2Q8WXD0 754 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 HPS1Q92902 700 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 APBA2Q99767 749 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 CLIC5Q9NZA1 410 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 RPL26L1Q9UNX3 145 aaKnown RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 OR6A2O95222 327 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 SNRPB2P08579 225 aaKnown RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 MBL2P11226 248 aaPredicted RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 NTSP30990 170 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ARMC8Q8IUR7 673 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 PLA2G4CQ9UP65 541 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ICAM1P05362 532 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ABRAQ8N0Z2 381 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ITGA3P26006 1051 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 RPL3P39023 403 aaKnown RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 REXO5Q96IC2 774 aaKnown RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CDHR5Q9HBB8 845 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 COG5Q9UP83 839 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 USP46P62068 366 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CYP4F2P78329 520 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CYP4F3Q08477 520 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 RUNDC3AQ59EK9 446 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 ULK3Q6PHR2 472 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 QRFPRQ96P65 431 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 DAGLAQ9Y4D2 1042 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 FAM25EA8MYX2 175 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GPR182O15218 404 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 TUBA4AP68366 448 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GIT2Q14161 759 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 ALG11Q2TAA5 492 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 RFX4Q33E94 735 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 HHIPL2Q6UWX4 724 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 FAM20CQ8IXL6 584 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■■■■ 68.2
SMCHD1-201ENST00000320876 MLYCDO95822 493 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 RASA1P20936 1047 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SSTR1P30872 391 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 HLA-DQA1Q5Y7H0 255 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 FAM131BQ86XD5 332 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 TOR4AQ9NXH8 423 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 UPP2O95045 317 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CKBP12277 381 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GJA8P48165 433 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 IL2P60568 153 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 FOLH1Q04609 750 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GRB10Q13322 594 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 B3GALT6Q96L58 329 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SNX6Q9UNH7 406 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 A0A087WZ62 844 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 MDM4O15151 490 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SYT12Q8IV01 421 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 UNKQ9C0B0 810 aaKnown RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 GPN1Q9HCN4 374 aaPredicted RBP17.09■□□□□ 0.33
SMCHD1-201ENST00000320876 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 TBCDQ9BTW9 1192 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 RBM22Q9NW64 420 aaKnown RBP eCLIP17.08■□□□□ 0.333e-6■■■■□ 21.6
SMCHD1-201ENST00000320876 ADIGQ0VDE8 80 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 TNFAIP8L3Q5GJ75 292 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 ANGPT4Q9Y264 503 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 CHP2O43745 196 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 STAG3L1P0CL83 205 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 ANTXR2P58335 489 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 RIPK1Q13546 671 aa17.08■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF879B4DU55 563 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 TYMPP19971 482 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 RXRBP28702 533 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 CCR4P51679 360 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 MTAPQ13126 283 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 TRMT11Q7Z4G4 463 aaKnown RBP17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 CKAP2Q8WWK9 683 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC9A8Q9Y2E8 581 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 WFS1O76024 890 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 PFKFB4Q16877 469 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 C1QTNF1Q9BXJ1 281 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 TBC1D30Q9Y2I9 924 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 RAMP2O60895 175 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 CKMP06732 381 aa17.08■□□□□ 0.32
SMCHD1-201ENST00000320876 OR1E1P30953 314 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms