RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 KCNK16Q96T55 309 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 EBNA1BP2Q99848 306 aaKnown RBP17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 ASNSD1Q9NWL6 643 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 ARHGAP26Q9UNA1 814 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 GIT1Q9Y2X7 761 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 C2CD4BA6NLJ0 364 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 TPP1O14773 563 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 B4GALT3O60512 393 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 PLIN3O60664 434 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 CRTAMO95727 393 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 IMPDH2P12268 514 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 PTPN1P18031 435 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 NDUFV1P49821 464 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 KRT81Q14533 505 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 SMAD1Q15797 465 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 UPP1Q16831 310 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 CCDC14Q49A88 953 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 KLC3Q6P597 504 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 PAOXQ6QHF9 649 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 MRPL10Q7Z7H8 261 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 TMEM110Q86TL2 294 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 LRRC39Q96DD0 335 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 RBM38Q9H0Z9 239 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 MAN1C1Q9NR34 630 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 AP4B1Q9Y6B7 739 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 A0A0J9YVX5 310 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 MYBPHLA2RUH7 354 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 GLRA3O75311 464 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 GRIA1P42261 906 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 PDE1CQ14123 709 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 TIFABQ6ZNK6 161 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF534Q76KX8 674 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 HACE1Q8IYU2 909 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 PRPF18Q99633 342 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 CRTAC1Q9NQ79 661 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 C6orf203Q9P0P8 240 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-201ENST00000316097 E9PBE3 544 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZSCAN9O15535 394 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZBTB14O43829 449 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 KLHL41O60662 606 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 CABYRO75952 493 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ENDOD1O94919 500 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ALDOAP04075 364 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 SRGAP2BP0DMP2 458 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 MYL4P12829 197 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 GPD1P21695 349 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF143P52747 638 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 BCAR1P56945 870 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 CBLBQ13191 982 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 DBN1Q16643 649 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 CYP4V2Q6ZWL3 525 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 TOP6BLQ8N6T0 577 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 TMEM30AQ9NV96 361 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 GMEB1Q9Y692 573 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 PDCD11Q14690 1871 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF195O14628 629 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 METTL18O95568 372 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 MYBPC1Q00872 1141 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 BST2Q10589 180 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 STILQ15468 1287 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 PIGZQ86VD9 579 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF280BQ86YH2 543 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 RTP4Q96DX8 246 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZFRQ96KR1 1074 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 LRGUKQ96M69 825 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 MED10Q9BTT4 135 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
SCAMP4-201ENST00000316097 ZNF623O75123 536 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 FBXO21O94952 628 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 TNFAIP8O95379 198 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 CDK4P11802 303 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 WARSP23381 471 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 PCSK6P29122 969 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 GMPRP36959 345 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 MAP3K7CLP57077 242 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 MRPS22P82650 360 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 HSP90AA5PQ58FG0 334 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 RARS2Q5T160 578 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 RBM12BQ8IXT5 1001 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 LINC01599Q8WXQ3 324 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 ATP2A3Q93084 1043 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 TNIP3Q96KP6 325 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 FAM96AQ9H5X1 160 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 CIDEBQ9UHD4 219 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 SH3BP1Q9Y3L3 701 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 E2F8A0AVK6 867 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 GABRDO14764 452 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 APOL1O14791 398 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 PRPSAP2O60256 369 aa17.49■□□□□ 0.39
SCAMP4-201ENST00000316097 KLF10Q13118 480 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms