RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 L1CAMP32004 1257 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 SERPINH1P50454 418 aaKnown RBP14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 CLCN6P51797 869 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 UBASH3AP57075 661 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 ARL13BQ3SXY8 428 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 C22orf39Q6P5X5 142 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 ARRDC3Q96B67 414 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 TBC1D31Q96DN5 1066 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 PPP1R9BQ96SB3 815 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 RETREG1Q9H6L5 497 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 ARHGAP20Q9P2F6 1191 aa14.93□□□□□ -0.02
PPP1CA-201ENST00000312989 CXorf51AA0A1B0GTR3 108 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 WASH4PA8MWX3 477 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 LATO43561 262 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 PLRG1O43660 514 aaKnown RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 RNASEH1O60930 286 aaKnown RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 RTN2O75298 545 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 IL1BP01584 269 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 FTLP02792 175 aaPredicted RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 PTMSP20962 102 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 NNMTP40261 264 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 KRT83P78385 493 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 KLHL30Q0D2K2 578 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CNTN1Q12860 1018 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CA9Q16790 459 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 PIP5KL1Q5T9C9 394 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 DAB2IPQ5VWQ8 1189 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 PSAPL1Q6NUJ1 521 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 TMC6Q7Z403 805 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 ATP11CQ8NB49 1132 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 OR2T34Q8NGX1 318 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 PIP4K2CQ8TBX8 421 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 OR8D1Q8WZ84 308 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 SYN2Q92777 582 aaPredicted RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 KLC2Q9H0B6 622 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 MIR1-1HGQ9H1L0 117 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 ATP13A1Q9HD20 1204 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 IFNKQ9P0W0 207 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 DNAI1Q9UI46 699 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CAPN11Q9UMQ6 739 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 FNDC3AQ9Y2H6 1198 aaKnown RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 WASF2Q9Y6W5 498 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CACNA1EQ15878 2313 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 CEP192Q8TEP8 1941 aa14.92□□□□□ -0.02
PPP1CA-201ENST00000312989 DOCK4Q8N1I0 1966 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 A0A1B0GVT2 93 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 A0A1W2PPC4 97 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 A0A1W2PR77 199 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 CBX4O00257 560 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 FSBPO95073 299 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 WNT1P04628 370 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 GNSP15586 552 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 GRIA4P48058 902 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 CSNK1EP49674 416 aaKnown RBP14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 NOVA1P51513 510 aaKnown RBP14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 AIF1P55008 147 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 FAM193AP78312 1265 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 KIF19Q2TAC6 998 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 UAP1L1Q3KQV9 507 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 POM121L1PQ3SYA9 428 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 ACCSLQ4AC99 568 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 DBX2Q6ZNG2 339 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 DPY19L3Q6ZPD9 716 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 RTL3Q8N8U3 475 aaKnown RBP14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 DEFB124Q8NES8 71 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 SLC6A18Q96N87 628 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 OMDQ99983 421 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 TNKS2Q9H2K2 1166 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 GPATCH2LQ9NWQ4 482 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 NCKAP1Q9Y2A7 1128 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 FCF1Q9Y324 198 aaKnown RBP14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 FRYQ5TBA9 3013 aa14.91□□□□□ -0.02
PPP1CA-201ENST00000312989 SLC7A4O43246 635 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 SYPP08247 313 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CEACAM1P13688 526 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 TCF4P15884 667 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CHRNA3P32297 505 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CCR5P51681 352 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 ZBED6P86452 979 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 RWDD4Q6NW29 188 aaKnown RBP14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 PPP1R2P3Q6NXS1 205 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 DCUN1D2Q6PH85 259 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 TMIEQ8NEW7 156 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 SNX19Q92543 992 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 SPON2Q9BUD6 331 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 ZDHHC5Q9C0B5 715 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 XPO4Q9C0E2 1151 aaKnown RBP14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CEP44Q9C0F1 390 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 WDFY3Q8IZQ1 3526 aa14.9□□□□□ -0.02
PPP1CA-201ENST00000312989 CHD5Q8TDI0 1954 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms