RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LRRC73Q5JTD7 316 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 PMS2CLQ68D20 193 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 DPY19L3Q6ZPD9 716 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 DCAF4L2Q8NA75 395 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 OR2I1PQ8NGU4 316 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 GRIN3AQ8TCU5 1115 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-201ENST00000311943 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-201ENST00000311943 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-201ENST00000311943 ITM2CQ9NQX7 267 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 USP36Q9P275 1121 aaKnown RBP12.31□□□□□ -0.44
SCFD1-201ENST00000311943 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 IP6K2Q9UHH9 426 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 RASA4BC9J798 803 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 MAP3K13O43283 966 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 RASA4O43374 803 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 RAMP2O60895 175 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PROSCO94903 275 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 IL1BP01584 269 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 DRD3P35462 400 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 RGRP47804 291 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 DPYSQ14117 519 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PIGHQ14442 188 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 POLNQ7Z5Q5 900 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 NIPA2Q8N8Q9 360 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ZNF419Q96HQ0 510 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 HSPA12BQ96MM6 686 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 CSPG4P5Q96PW8 444 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 LRRC19Q9H756 370 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 EBF2Q9HAK2 575 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 WSB2Q9NYS7 404 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 EPN1Q9Y6I3 576 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 INSIG1O15503 277 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ATP9BO43861 1147 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 NDUFA10O95299 355 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ASLP04424 464 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 SRPRAP08240 638 aaKnown RBP12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ITIH2P19823 946 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 FECHP22830 423 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 SLC8A1P32418 973 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PCK1P35558 622 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ETFBP38117 255 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 ARSEP51690 589 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 CDH6P55285 790 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 SLC12A1Q13621 1099 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 CST6Q15828 149 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 RUBCNQ92622 972 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PIGKQ92643 395 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 EPAS1Q99814 870 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 SLC25A13Q9UJS0 675 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
SCFD1-201ENST00000311943 DFFAO00273 331 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 WNT9AO14904 365 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 MUSKO15146 869 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 DAPK3O43293 454 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 RNASEH2AO75792 299 aaKnown RBP12.29□□□□□ -0.44
SCFD1-201ENST00000311943 LCA5LO95447 670 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
SCFD1-201ENST00000311943 SEMG2Q02383 582 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 DPYSL2Q16555 572 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 C22orf39Q6P5X5 142 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 PCDH19Q8TAB3 1148 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 TSC1Q92574 1164 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
SCFD1-201ENST00000311943 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-201ENST00000311943 C2orf49Q9BVC5 232 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-201ENST00000311943 FBXL12Q9NXK8 326 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 RALGAPA1Q6GYQ0 2036 aa12.29□□□□□ -0.44
SCFD1-201ENST00000311943 EDDM13A0A1B0GTR0 161 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 COMTP21964 271 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 CD6P30203 668 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ADCY2Q08462 1091 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 CYTH1Q15438 398 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 GANCQ8TET4 914 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 RFFLQ8WZ73 363 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ARRDC3Q96B67 414 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 CALN1Q9BXU9 219 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SEMA4GQ9NTN9 838 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 PPM1HQ9ULR3 514 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 TNRC6BQ9UPQ9 1833 aaKnown RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 KDELR3O43731 214 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 ACADMP11310 421 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 CNR2P34972 360 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms