RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 PRDM5Q9NQX1 630 aaPredicted RBP23.31■■□□□ 1.32
CTSF-201ENST00000310325 OLA1Q9NTK5 396 aaKnown RBP23.31■■□□□ 1.32
CTSF-201ENST00000310325 RBM22Q9NW64 420 aaKnown RBP eCLIP23.31■■□□□ 1.32
CTSF-201ENST00000310325 KCNK4Q9NYG8 393 aa23.31■■□□□ 1.32
CTSF-201ENST00000310325 LRFN2Q9ULH4 789 aa23.31■■□□□ 1.32
CTSF-201ENST00000310325 MYLKQ15746 1914 aa23.31■■□□□ 1.32
CTSF-201ENST00000310325 MTMR11A4FU01 709 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 SOAT2O75908 522 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 HAUS5O94927 633 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 SERPINB3P29508 390 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 RASSF2P50749 326 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 MS4A13Q5J8X5 152 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PCID2Q5JVF3 399 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PDPK2PQ6A1A2 396 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 CMC1Q7Z7K0 106 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 UMODL1-AS1Q8N2C9 162 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 ATP6V0D2Q8N8Y2 350 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PPP1R14CQ8TAE6 165 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 SPPL2BQ8TCT7 592 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 AZIN2Q96A70 460 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 ATXN7L3BQ96GX2 97 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 TMEM237Q96Q45 408 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 RAB3IPQ96QF0 476 aaPredicted RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 SEZ6LQ9BYH1 1024 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 NOL6Q9H6R4 1146 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 IARS2Q9NSE4 1012 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTSF-201ENST00000310325 IPO11Q9UI26 975 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 TIMM44O43615 452 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 NEBLO76041 1014 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PROCP04070 461 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 RHOQP17081 205 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PSEN1P49768 467 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 RPL10AP62906 217 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 CDK18Q07002 472 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 TRIP4Q15650 581 aaPredicted RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 MBLAC2Q68D91 279 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 FUT10Q6P4F1 479 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 ZCCHC23Q6ZST2 131 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 ARID3BQ8IVW6 561 aaPredicted RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 SEPT8Q92599 483 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 ZYG11BQ9C0D3 744 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 TLR8Q9NR97 1041 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 THAP1Q9NVV9 213 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 NSMCE4AQ9NXX6 385 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PPARGC1AQ9UBK2 798 aaKnown RBP23.3■■□□□ 1.32
CTSF-201ENST00000310325 HCSTQ9UBK5 93 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 STK38LQ9Y2H1 464 aa23.3■■□□□ 1.32
CTSF-201ENST00000310325 PRKCGP05129 697 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 NDST2P52849 883 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 ZBTB16Q05516 673 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 GPR17Q13304 367 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 PCLAFQ15004 111 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 PSMD5Q16401 504 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 DENND5AQ6IQ26 1287 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 CCDC117Q8IWD4 279 aaPredicted RBP23.29■■□□□ 1.32
CTSF-201ENST00000310325 SLC7A6OSQ96CW6 309 aaPredicted RBP23.29■■□□□ 1.32
CTSF-201ENST00000310325 ZNF778Q96MU6 729 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 MCMBPQ9BTE3 642 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 C20orf27Q9GZN8 174 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 ZNF395Q9H8N7 513 aaPredicted RBP23.29■■□□□ 1.32
CTSF-201ENST00000310325 ENTPD7Q9NQZ7 604 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 BAIAP2L1Q9UHR4 511 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 SLC27A5Q9Y2P5 690 aa23.29■■□□□ 1.32
CTSF-201ENST00000310325 HNRNPCL1O60812 293 aaKnown RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 FGF3P11487 239 aaPredicted RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 ADRA1AP35348 466 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 MNAT1P51948 309 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 MGAT5BQ3V5L5 792 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 PKN3Q6P5Z2 889 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 BTN2A3PQ96KV6 586 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 SEPT5Q99719 369 aaPredicted RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 NOD2Q9HC29 1040 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 FBXO6Q9NRD1 293 aaPredicted RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 TMEM248Q9NWD8 314 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 DONSONQ9NYP3 566 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 TMEM216Q9P0N5 145 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 HBS1LQ9Y450 684 aaKnown RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 TET1Q8NFU7 2136 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 C2orf71A6NGG8 1288 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 TRAFD1O14545 582 aaPredicted RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 CHUKO15111 745 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 TBX18O95935 607 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 MPOP05164 745 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 F7P08709 466 aaPredicted RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 ELAVL2Q12926 359 aaKnown RBP23.28■■□□□ 1.32
CTSF-201ENST00000310325 TAF10Q12962 218 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 CCDC153Q494R4 210 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 TFAP2DQ7Z6R9 452 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 NPAS4Q8IUM7 802 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 SPATA17Q96L03 361 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 FSD1LQ9BXM9 530 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 LNPEPQ9UIQ6 1025 aa23.28■■□□□ 1.32
CTSF-201ENST00000310325 IGLV3-10A0A075B6K4 115 aa23.27■■□□□ 1.32
CTSF-201ENST00000310325 HOXA2O43364 376 aa23.27■■□□□ 1.32
CTSF-201ENST00000310325 SMARCB1Q12824 385 aa23.27■■□□□ 1.32
CTSF-201ENST00000310325 POU6F1Q14863 301 aa23.27■■□□□ 1.32
CTSF-201ENST00000310325 RTP2Q5QGT7 225 aa23.27■■□□□ 1.32
CTSF-201ENST00000310325 RSPO2Q6UXX9 243 aaPredicted RBP23.27■■□□□ 1.32
CTSF-201ENST00000310325 RNF19BQ6ZMZ0 732 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms