RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 XKR4Q5GH76 650 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 PPM1LQ5SGD2 360 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 AP1ARQ63HQ0 302 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 EPGNQ6UW88 154 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 ARHGAP36Q6ZRI8 547 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 KDELC2Q7Z4H8 507 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
CSDC2-201ENST00000306149 LPPQ93052 612 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 CMTM5Q96DZ9 223 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 COLEC11Q9BWP8 271 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 TASP1Q9H6P5 420 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 POMPQ9Y244 141 aa15.41■□□□□ 0.06
CSDC2-201ENST00000306149 AIM2O14862 343 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 TRIM13O60858 407 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 LRIG2O94898 1065 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 EPHA3P29320 983 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 SERPINB6P35237 376 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 TBL3Q12788 808 aaKnown RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 KLF10Q13118 480 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 GRB14Q14449 540 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 EML3Q32P44 896 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 OLFML2BQ68BL8 750 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 FAM35AQ86V20 835 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 ARHGAP18Q8N392 663 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 SIK2Q9H0K1 926 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 GBA3Q9H227 469 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 WDCPQ9H6R7 721 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 CDY2AQ9Y6F7 541 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 CDY1Q9Y6F8 540 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 GABRDO14764 452 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 MT-CYBP00156 380 aaPredicted RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 MYL3P08590 195 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PIM1P11309 404 aaPredicted RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PRDX6P30041 224 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 CDK7P50613 346 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 CLCNKBP51801 687 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PAN2Q504Q3 1202 aaKnown RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 SFT2D3Q587I9 215 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 PDZD4Q76G19 769 aaPredicted RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 CLEC14AQ86T13 490 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 C3orf58Q8NDZ4 430 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 ISL2Q96A47 359 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 TRIM4Q9C037 500 aa15.4■□□□□ 0.06
CSDC2-201ENST00000306149 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
CSDC2-201ENST00000306149 AXLP30530 894 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 CDC42EP1Q00587 391 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 RWDD4Q6NW29 188 aaKnown RBP15.39■□□□□ 0.05
CSDC2-201ENST00000306149 TLK2Q86UE8 772 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 CNTD1Q8N815 330 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 RNF34Q969K3 372 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 GAD1Q99259 594 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 DNAI2Q9GZS0 605 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 SSX2IPQ9Y2D8 614 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 ZNF236Q9UL36 1845 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 RNASEH1O60930 286 aaKnown RBP15.39■□□□□ 0.05
CSDC2-201ENST00000306149 PEX2P28328 305 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 RAB27AP51159 221 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 CTBP1Q13363 440 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 POU6F1Q14863 301 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 TMEM198Q66K66 360 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 KCTD4Q8WVF5 259 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 SCYL1Q96KG9 808 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 MARK4Q96L34 752 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 ACE2Q9BYF1 805 aaPredicted RBP15.39■□□□□ 0.05
CSDC2-201ENST00000306149 NUF2Q9BZD4 464 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 TCF7L2Q9NQB0 619 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 MIOSQ9NXC5 875 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 ADAM28Q9UKQ2 775 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 TBC1D30Q9Y2I9 924 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 TSC2P49815 1807 aa15.39■□□□□ 0.05
CSDC2-201ENST00000306149 DFFAO00273 331 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 JUNP05412 331 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 SBK3P0C264 359 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 GABRB3P28472 473 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 PSEN2P49810 448 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 NAGLUP54802 743 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 ADAM17P78536 824 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 USP10Q14694 798 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 PLEKHH3Q7Z736 793 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 DENND6AQ8IWF6 608 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 PNPLA1Q8N8W4 532 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 PPP1R10Q96QC0 940 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 KLHL4Q9C0H6 718 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 FLRT1Q9NZU1 646 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 MPOP05164 745 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 RAG1P15918 1043 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 GRIA4P48058 902 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 ATXN3P54252 364 aaPredicted RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 SLC41A1Q8IVJ1 513 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 RNF217Q8TC41 542 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 NTAN1Q96AB6 310 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 TEKT5Q96M29 485 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 SLC9A7Q96T83 725 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 OMDQ99983 421 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms