RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PRDM8Q9NQV8 689 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 VPS28Q9UK41 221 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CCNT2O60583 730 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 RARAP10276 462 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ITGAXP20702 1163 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 HALP42357 657 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MMP13P45452 471 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CLCN5P51795 746 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CSNK2BP67870 215 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 BMPR2Q13873 1038 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MINDY2Q8NBR6 621 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TMEM159Q96B96 161 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NEK6Q9HC98 313 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MAPK8P45983 427 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 RHOAP61586 193 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SLC6A3Q01959 620 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF280DQ6N043 979 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CD101Q93033 1021 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MCCC1Q96RQ3 725 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CHID1Q9BWS9 393 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DNAJC18Q9H819 358 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PXMP2Q9NR77 195 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 KCNQ5Q9NR82 932 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 OPTCQ9UBM4 332 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 WBP11Q9Y2W2 641 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SSNA1O43805 119 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 MGRN1O60291 552 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 THP07101 528 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 RHOCP08134 193 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DRD4P21917 467 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DGKAP23743 735 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CASP4P49662 377 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 DDX39BQ13838 428 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TAS1R2Q8TE23 839 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 PPP3R2Q96LZ3 170 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC59Q9P031 241 aaKnown RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TRAFD1O14545 582 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-201ENST00000302516 UGT2B11O75310 529 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SEC22BO75396 215 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 TCF4P15884 667 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 NTSP30990 170 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SLC12A3P55017 1021 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 ADIGQ0VDE8 80 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 LAMTOR4Q0VGL1 99 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 POU6F1Q14863 301 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 GJD3Q8N144 294 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC185Q8N715 623 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 KNDC1Q76NI1 1749 aa7.75□□□□□ -1.17
SF3B3-201ENST00000302516 SIGLEC16A6NMB1 481 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 RAMP2O60895 175 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ITGB6P18564 788 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ADRA1DP25100 572 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PRDX6P30041 224 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MTM1Q13496 603 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SEC23AQ15436 765 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 STAG3L4Q8TBR4 150 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF668Q96K58 619 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ELOVL4Q9GZR5 314 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ACSS3Q9H6R3 686 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MICAL2O94851 1124 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CES1P23141 567 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 GABRB2P47870 512 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 IL2P60568 153 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ACVR2BQ13705 512 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 GLT6D1Q7Z4J2 308 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 NECAB2Q7Z6G3 386 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LRRC17Q8N6Y2 441 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SPPL2AQ8TCT8 520 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 RAET1EQ8TD07 263 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PLEKHG4BQ96PX9 1271 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC3Q9BQI4 270 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 KANSL3Q9P2N6 904 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LOXHD1Q8IVV2 1947 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ADCY6O43306 1168 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MGAT1P26572 445 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PSMD5Q16401 504 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MACC1Q6ZN28 852 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CXXC5Q7LFL8 322 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MILR1Q7Z6M3 343 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TMEM86AQ8N2M4 240 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PIK3C3Q8NEB9 887 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LENG9Q96B70 501 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZHX1-C8orf76Q96EF9 292 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TBC1D10AQ9BXI6 508 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SAE1Q9UBE0 346 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ENTPD4Q9Y227 616 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CXCR2P25025 360 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 POLR2LP62875 67 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PCID2Q5JVF3 399 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 IL27RAQ6UWB1 636 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MTSS1LQ765P7 747 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 HELQQ8TDG4 1101 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF670Q9BS34 389 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FAM126AQ9BYI3 521 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ETNK2Q9NVF9 386 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ARMCX1Q9P291 453 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MAGEL2Q9UJ55 1249 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TSPAN16Q9UKR8 245 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms