RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SERPINH1P50454 418 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAD2L1Q13257 205 aaPredicted RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RETSATQ6NUM9 610 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FBXL19Q6PCT2 694 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CLYBLQ8N0X4 340 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CSGALNACT1Q8TDX6 532 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PROX1Q92786 737 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NLNQ9BYT8 704 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EPN2O95208 641 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LRATO95237 230 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IFNA16P05015 189 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ADRB2P07550 413 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SPATA31D3P0C874 917 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRAF3Q13114 568 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PLA2G4EQ3MJ16 856 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SPATA31D4Q6ZUB0 917 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BPIFB6Q8NFQ5 453 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TLR10Q9BXR5 811 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EFCAB10A6NFE3 127 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MFN2O95140 757 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ERCC2P18074 760 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PAX7P23759 505 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NEK3P51956 506 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OSCP1Q8WVF1 389 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RORBQ92753 470 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OMA1Q96E52 524 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ARMC7Q9H6L4 198 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SNPHO15079 494 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TBL1XO60907 577 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CYP2A6P11509 494 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EIF2B5Q13144 721 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SPIDRQ14159 915 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 R3HCC1LQ7Z5L2 792 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RGL4Q8IZJ4 473 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SENP8Q96LD8 212 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CDK5RAP1Q96SZ6 601 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AVILO75366 819 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GPAT3Q53EU6 434 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ENKURQ8TC29 256 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SPATA31A6Q5VVP1 1343 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 WNT10BO00744 389 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ASNA1O43681 348 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GSTM5P46439 218 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NR2C2P49116 596 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ABRQ12979 859 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TERB1Q8NA31 727 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NARS2Q96I59 477 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OR12D3Q9UGF7 316 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TBC1D3BA6NDS4 549 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LGALS2P05162 132 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLC26A2P50443 739 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TBX2Q13207 712 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM9CQ8IZT9 166 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MRPL48Q96GC5 212 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AMHP03971 560 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ME2P23368 584 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PIK3R1P27986 724 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GRIA3P42263 894 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SFSWAPQ12872 951 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ADRM1Q16186 407 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PRMT9Q6P2P2 845 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C2orf73Q8N5S3 287 aaPredicted RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZNF671Q8TAW3 534 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLC35C1Q96A29 364 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CORO1BQ9BR76 489 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EPS8L2Q9H6S3 715 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MYRFQ9Y2G1 1151 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ANKDD1BA6NHY2 528 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LINC00032P0C843 101 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NELFEP18615 380 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SELENOMQ8WWX9 145 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 UGT2B28Q9BY64 529 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAT2BQ9NZL9 334 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ENTPD4Q9Y227 616 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTPN1P18031 435 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms