RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 FAM107AO95990 144 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 EN2P19622 333 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-202ENST00000297979 IFNAR2P48551 515 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 PARP15Q460N3 678 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 C5orf22Q49AR2 442 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 FAM133BQ5BKY9 247 aaKnown RBP14.53□□□□□ -0.08
C9orf3-202ENST00000297979 ITIH5Q86UX2 942 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 C4orf33Q8N1A6 199 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 DYDC1Q8WWB3 177 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 SP110Q9HB58 689 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 MOCS1Q9NZB8 636 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-202ENST00000297979 ALPK3Q96L96 1907 aa14.53□□□□□ -0.08
C9orf3-202ENST00000297979 C2orf78A6NCI8 922 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 AP3B1O00203 1094 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 STC2O76061 302 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 ALDH1A2O94788 518 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 CNPP09543 421 aaKnown RBP14.52□□□□□ -0.08
C9orf3-202ENST00000297979 OR1E1P30953 314 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 SLC6A4P31645 630 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 GBP2P32456 591 aaPredicted RBP14.52□□□□□ -0.08
C9orf3-202ENST00000297979 CCDC15Q0P6D6 951 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 HNRNPDQ14103 355 aaKnown RBP14.52□□□□□ -0.08
C9orf3-202ENST00000297979 CRYMQ14894 314 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 LRRC14Q15048 493 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 LINC00523Q86TU6 105 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 TRIM74Q86UV6 250 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 TRIM73Q86UV7 250 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 DENND1CQ8IV53 801 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.08
C9orf3-202ENST00000297979 CCT8L2Q96SF2 557 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 SSU72Q9NP77 194 aaKnown RBP14.52□□□□□ -0.08
C9orf3-202ENST00000297979 ANAPC1Q9H1A4 1944 aa14.52□□□□□ -0.08
C9orf3-202ENST00000297979 SPAG7O75391 227 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 PEX11BO96011 259 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 KRT4P19013 534 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 RENBPP51606 427 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 SLC18A1P54219 525 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 GEMP55040 296 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 YBEYP58557 167 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-202ENST00000297979 POLD3Q15054 466 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-202ENST00000297979 E2F5Q15329 346 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 RFWD3Q6PCD5 774 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 PSRC1Q6PGN9 363 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-202ENST00000297979 ZNF354CQ86Y25 554 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 SPATA22Q8NHS9 363 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 AZIN2Q96A70 460 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 TTC17Q96AE7 1141 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 RNF38Q9H0F5 515 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 PLXNA4Q9HCM2 1894 aa14.52□□□□□ -0.09
C9orf3-202ENST00000297979 J3KR12 359 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TGM5O43548 720 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 POLBP06746 335 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 SPATA31D3P0C874 917 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 CORO1AP31146 461 aaKnown RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 NPY2RP49146 381 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 CDH17Q12864 832 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 RABGAP1LQ5R372 815 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TMEM240Q5SV17 173 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TTC39BQ5VTQ0 682 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 SPATA31D4Q6ZUB0 917 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TMEM150AQ86TG1 271 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 CHMP6Q96FZ7 201 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 APOL2Q9BQE5 337 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 KLF16Q9BXK1 252 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 FAM107BQ9H098 131 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 RETREG1Q9H6L5 497 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ZNF334Q9HCZ1 680 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 MLXIPLQ9NP71 852 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 GKN1Q9NS71 199 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 MT-CYBP00156 380 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 SPANXN3Q5MJ09 141 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 CFAP52Q8N1V2 620 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ZNF473Q8WTR7 871 aaKnown RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 NSMCE1Q8WV22 266 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TBL1YQ9BQ87 522 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TYROBPO43914 113 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 FAM155BO75949 473 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 KRT37O76014 449 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 MT-ND3P03897 115 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 KLKB1P03952 638 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 IRF1P10914 325 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 SERINC3Q13530 473 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 LGSNQ5TDP6 509 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 MARC1Q5VT66 337 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TMC7Q7Z402 723 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 TAX1BP1Q86VP1 789 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 CDKL2Q92772 493 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ALKBH8Q96BT7 664 aaKnown RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 PABPC5Q96DU9 382 aaKnown RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ZNF317Q96PQ6 595 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-202ENST00000297979 IL22Q9GZX6 179 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 ASB3Q9Y575 518 aa14.51□□□□□ -0.09
C9orf3-202ENST00000297979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-202ENST00000297979 OBSL1O75147 1896 aa14.5□□□□□ -0.09
C9orf3-202ENST00000297979 CXCL14O95715 111 aa14.5□□□□□ -0.09
C9orf3-202ENST00000297979 F11P03951 625 aa14.5□□□□□ -0.09
C9orf3-202ENST00000297979 MBL2P11226 248 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms