RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 OR52K2Q8NGK3 314 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 MRRFQ96E11 262 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 SAMD11Q96NU1 681 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 TRIM56Q9BRZ2 755 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 CASS4Q9NQ75 786 aa23.29■■□□□ 1.32
PTX3-201ENST00000295927 AAR2Q9Y312 384 aaKnown RBP23.29■■□□□ 1.32
PTX3-201ENST00000295927 TRAV19A0A0A6YYK7 116 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 A0A0D9SEW6 157 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 A0A1B0GVM2 712 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 TCAF2A6NFQ2 919 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 PIAS1O75925 651 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 C1RP00736 705 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 ATP5DP30049 168 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 GNA12Q03113 381 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 MARC1Q5VT66 337 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 CHST9Q7L1S5 443 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 ARNTL2Q8WYA1 636 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 STAMBPL1Q96FJ0 436 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 CYTH2Q99418 400 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 MAGEH1Q9H213 219 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 YBX2Q9Y2T7 364 aaKnown RBP23.28■■□□□ 1.32
PTX3-201ENST00000295927 PCDHA11Q9Y5I1 949 aa23.28■■□□□ 1.32
PTX3-201ENST00000295927 ANXA9O76027 345 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 MT-CYBP00156 380 aaPredicted RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 GSTA2P09210 222 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 ERVK-21P61565 698 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 TMED2Q15363 201 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 CASC4Q6P4E1 433 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 EXOC3L1Q86VI1 746 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 TEX26Q8N6G2 289 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 TTC16Q8NEE8 873 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 NSMCE1Q8WV22 266 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 SLC46A2Q9BY10 475 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 NT5MQ9NPB1 228 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 SYBUQ9NX95 663 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 HELZP42694 1942 aaKnown RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 CHD9Q3L8U1 2897 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 FOXO6A8MYZ6 492 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 PRAMEF11O60813 436 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 PTPN2P17706 415 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 STX2P32856 288 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 NUMBP49757 651 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 EPHA5P54756 1037 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 ZNF177Q13360 481 aaPredicted RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 TTC39BQ5VTQ0 682 aaPredicted RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 PRPF39Q86UA1 669 aaKnown RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 DNAAF3Q8N9W5 541 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 OR7D4Q8NG98 312 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 SHKBP1Q8TBC3 707 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 APOL2Q9BQE5 337 aa23.27■■□□□ 1.32
PTX3-201ENST00000295927 DNMT3BQ9UBC3 853 aaKnown RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 LSM7Q9UK45 103 aaKnown RBP23.27■■□□□ 1.32
PTX3-201ENST00000295927 PER2O15055 1255 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 RASA2Q15283 850 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 KBTBD12Q3ZCT8 623 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 NAPEPLDQ6IQ20 393 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 PDE12Q6L8Q7 609 aaKnown RBP23.26■■□□□ 1.31
PTX3-201ENST00000295927 LEKR1Q6ZMV7 388 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 GSDMBQ8TAX9 411 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 TCEAL4Q96EI5 215 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 PPP1R2P1Q96PQ5 205 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 PAFAH2Q99487 392 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 DHRS4Q9BTZ2 278 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 PSD3Q9NYI0 1048 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 CFAP97Q9P2B7 532 aa23.26■■□□□ 1.31
PTX3-201ENST00000295927 PSMC3IPQ9P2W1 217 aaPredicted RBP23.26■■□□□ 1.31
PTX3-201ENST00000295927 C1QAP02745 245 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 RHOCP08134 193 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 PFKLP17858 780 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 HOXA9P31269 272 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 PBX2P40425 430 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 GEMP55040 296 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 TAOK1Q7L7X3 1001 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 SLC25A51Q9H1U9 297 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 PDFQ9HBH1 243 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 TBC1D30Q9Y2I9 924 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 NOTCH4Q99466 2003 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 ILVBLA1L0T0 632 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 GFRA2O00451 464 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 FGF19O95750 216 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 HOXD9P28356 352 aaPredicted RBP23.25■■□□□ 1.31
PTX3-201ENST00000295927 MSH2P43246 934 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 PPARDQ03181 441 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 TNK2Q07912 1038 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 LBRQ14739 615 aaKnown RBP23.25■■□□□ 1.31
PTX3-201ENST00000295927 STEAP4Q687X5 459 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 IL31Q6EBC2 164 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 HTR3DQ70Z44 454 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 LINC00523Q86TU6 105 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 SETD3Q86TU7 594 aaPredicted RBP23.25■■□□□ 1.31
PTX3-201ENST00000295927 CCNJLQ8IV13 435 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 FAM217AQ8IXS0 508 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 CAPS2Q9BXY5 557 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 CERS4Q9HA82 394 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 BFARQ9NZS9 450 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 SH3BP1Q9Y3L3 701 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 ATG2AQ2TAZ0 1938 aa23.25■■□□□ 1.31
PTX3-201ENST00000295927 TBL1XO60907 577 aa23.24■■□□□ 1.31
PTX3-201ENST00000295927 MOSPD3O75425 235 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms