RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ACTL7AQ9Y615 435 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 ZCWPW2A0A1B0GU75 182 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 MATN3O15232 486 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 TROVE2P10155 538 aaKnown RBP eCLIP18.26■□□□□ 0.51
CAPN1-201ENST00000279247 SPPL2BQ8TCT7 592 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 SLC39A13Q96H72 371 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 LRRC37BQ96QE4 947 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 TBL1YQ9BQ87 522 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 NAT9Q9BTE0 207 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 SLC40A1Q9NP59 571 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 SLC2A6Q9UGQ3 507 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 CCL22O00626 93 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 VAPBO95292 243 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 TARSP26639 723 aaKnown RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 OR1E1P30953 314 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 AVPR1AP37288 418 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ZNF135P52742 658 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 BST1Q10588 318 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SETDB1Q15047 1291 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ANKS3Q6ZW76 656 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 TNS4Q8IZW8 715 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 DCLK2Q8N568 766 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ATP6V0D2Q8N8Y2 350 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 MTBPQ96DY7 904 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 TMEM237Q96Q45 408 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ZYG11BQ9C0D3 744 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 MTO1Q9Y2Z2 717 aaKnown RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 GJB5O95377 273 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ACVRL1P37023 503 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 KCNJ2P63252 427 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 TAF12Q16514 161 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SPANXN3Q5MJ09 141 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 CES4AQ5XG92 561 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 BEND5Q7L4P6 421 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 NLRP9Q7RTR0 991 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 BHMTQ93088 406 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 GKN1Q9NS71 199 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SMPD4Q9NXE4 827 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 USH1CQ9Y6N9 552 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 UNC80Q8N2C7 3258 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 FAM237BA0A1B0GVD1 139 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SLC38A8A6NNN8 435 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SPATA31D3P0C874 917 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 GP5P40197 560 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 CD86P42081 329 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 MAGEA11P43364 429 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 DSC2Q02487 901 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 CTBP1Q13363 440 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ESRP1Q6NXG1 681 aaKnown RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SPATA31D4Q6ZUB0 917 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 MTDHQ86UE4 582 aaKnown RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 CCNJLQ8IV13 435 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ARHGAP18Q8N392 663 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 E2F7Q96AV8 911 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
CAPN1-201ENST00000279247 CYP4F11Q9HBI6 524 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 RXFP1Q9HBX9 757 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 SLC39A10Q9ULF5 831 aa18.25■□□□□ 0.51
CAPN1-201ENST00000279247 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 CBX6O95503 412 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 DHRS4L1P0CG22 281 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 SLC2A3P11169 496 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 COL6A1P12109 1028 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 ZBTB16Q05516 673 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 LACTB2Q53H82 288 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 FSTL4Q6MZW2 842 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 LGI2Q8N0V4 545 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 LZTR1Q8N653 840 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 C10orf82Q8WW14 230 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 BTN2A3PQ96KV6 586 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 TRIM55Q9BYV6 548 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 LYPLA1O75608 230 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 RTN3O95197 1032 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 ALDH3A1P30838 453 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 ARTNQ5T4W7 220 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 ARID3BQ8IVW6 561 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 DENND6AQ8IWF6 608 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 DPF3Q92784 378 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 KLHL29Q96CT2 875 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 SPON2Q9BUD6 331 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 IL22Q9GZX6 179 aa18.24■□□□□ 0.51
CAPN1-201ENST00000279247 FBXO6Q9NRD1 293 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 AAR2Q9Y312 384 aaKnown RBP18.24■□□□□ 0.51
CAPN1-201ENST00000279247 BUD23O43709 281 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 DNAJC6O75061 913 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 IRF9Q00978 393 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 MPP3Q13368 585 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 CNGA3Q16281 694 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 RGS9BPQ6ZS82 235 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 RAPH1Q70E73 1250 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TMEM135Q86UB9 458 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 MOCOSQ96EN8 888 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 VN1R3Q9BXE9 311 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 SNX15Q9NRS6 342 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 HAO1Q9UJM8 370 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 SLC12A4Q9UP95 1085 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms