RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KRT73Q86Y46 540 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 TUSC5Q8IXB3 177 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 ELOA2Q8IYF1 753 aaPredicted RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 MAML2Q8IZL2 1156 aaPredicted RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 CCDC150Q8NCX0 1101 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 CCDC148Q8NFR7 591 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 OR5AN1Q8NGI8 311 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 NFKBIDQ8NI38 313 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 METTL6Q8TCB7 284 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 RMDN1Q96DB5 314 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 VPS50Q96JG6 964 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 CDK5RAP1Q96SZ6 601 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 TXN2Q99757 166 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 ZPBPQ9BS86 351 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 APOL6Q9BWW8 343 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 TEX12Q9BXU0 123 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 MTG2Q9H4K7 406 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 DNAJC18Q9H819 358 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 CHODLQ9H9P2 273 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 A1CFQ9NQ94 594 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 G6PC2Q9NQR9 355 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 SIRT3Q9NTG7 399 aaPredicted RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 SMPD4Q9NXE4 827 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 NINJ2Q9NZG7 142 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 MRPL15Q9P015 296 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 MARCH4Q9P2E8 410 aaPredicted RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 TRMT112Q9UI30 125 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 SCOCQ9UIL1 159 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 PTBP2Q9UKA9 531 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 PCDHA6Q9UN73 950 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 LIPT1Q9Y234 373 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 PIN4Q9Y237 131 aaKnown RBP4.79□□□□□ -1.64
CD44-202ENST00000278385 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 TMED5Q9Y3A6 229 aa4.79□□□□□ -1.64
CD44-202ENST00000278385 ZNF804BA4D1E1 1349 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 IL16Q14005 1332 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 RNF103-CHMP3A0A140T963 221 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 A4D1N5 150 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 A8MV72 311 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 RNF103O00237 685 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 PCDH8O95206 1070 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 CCNDBP1O95273 360 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 GAAP10253 952 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 HOXC8P31273 242 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 GARSP41250 739 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 ACAA2P42765 397 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 HSD17B4P51659 736 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 DCTN2Q13561 401 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 PPP1R7Q15435 360 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 MAPKAPK3Q16644 382 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 MPP7Q5T2T1 576 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 TPGS2Q68CL5 300 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 ANO7Q6IWH7 933 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 FAM180AQ6UWF9 173 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 C15orf52Q6ZUT6 534 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 CHST3Q7LGC8 479 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 PRRT2Q7Z6L0 340 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 ADGRA1Q86SQ6 560 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 ADCK1Q86TW2 530 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 TAX1BP1Q86VP1 789 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 WDR63Q8IWG1 891 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 VPS52Q8N1B4 723 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 WDTC1Q8N5D0 677 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 CDYL2Q8N8U2 506 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 FAM71DQ8N9W8 422 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 C8orf58Q8NAV2 365 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 POGLUT1Q8NBL1 392 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 PCSK9Q8NBP7 692 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 SUPT20HQ8NEM7 779 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 OR2I1PQ8NGU4 316 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 OR14K1Q8NGZ2 314 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 KIF18AQ8NI77 898 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 RNF139Q8WU17 664 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 SCFD2Q8WU76 684 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 CFHR4Q92496 578 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 NCSTNQ92542 709 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 RSC1A1Q92681 617 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 SLC7A6OSQ96CW6 309 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 TTPALQ9BTX7 342 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 ADI1Q9BV57 179 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 HSD3B7Q9H2F3 369 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 TP63Q9H3D4 680 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 NELFAQ9H3P2 528 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 MRPL44Q9H9J2 332 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 SMURF2Q9HAU4 748 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 ANO10Q9NW15 660 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 CPSF3Q9UKF6 684 aaKnown RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 CORO1CQ9ULV4 474 aaPredicted RBP4.78□□□□□ -1.64
CD44-202ENST00000278385 JRKLQ9Y4A0 524 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 PCDHB6Q9Y5E3 794 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 N6AMT1Q9Y5N5 214 aa4.78□□□□□ -1.64
CD44-202ENST00000278385 KIF13BQ9NQT8 1826 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms