RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
PRPF6-201ENST00000266079 ALLCQ8N6M5 410 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 KCNK4Q9NYG8 393 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
PRPF6-201ENST00000266079 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 TMEM191CA6NGB0 347 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 GRM6O15303 877 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 LPXNO60711 386 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 BANF1O75531 89 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
PRPF6-201ENST00000266079 VCLP18206 1134 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 SSTR1P30872 391 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 KDSRQ06136 332 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 GPR17Q13304 367 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 KLHL38Q2WGJ6 581 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 SCYL2Q6P3W7 929 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 DDX53Q86TM3 631 aaKnown RBP12.9□□□□□ -0.34
PRPF6-201ENST00000266079 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 ARNTL2Q8WYA1 636 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 IRGQQ8WZA9 623 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 CATSPER2Q96P56 530 aa12.9□□□□□ -0.34
PRPF6-201ENST00000266079 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.34
PRPF6-201ENST00000266079 A0A0J9YVX5 310 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 RFXAPO00287 272 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 SEC24AO95486 1093 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PAX3P23760 479 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 TXNRD3NBQ6F5E7 133 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 DRICH1Q6PGQ1 229 aaPredicted RBP12.89□□□□□ -0.35
PRPF6-201ENST00000266079 B3GNT6Q6ZMB0 384 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PHOSPHO2Q8TCD6 241 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
PRPF6-201ENST00000266079 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 KLHL4Q9C0H6 718 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 NDC80O14777 642 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PER2O15055 1255 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 AP1G1O43747 822 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 MT-ND3P03897 115 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 CHN2P52757 468 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 RPL26P61254 145 aaKnown RBP12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PDK3Q15120 406 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 HIF1AQ16665 826 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 LRRC36Q1X8D7 754 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 SYPL2Q5VXT5 272 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 DNAJC1Q96KC8 554 aaKnown RBP12.89□□□□□ -0.35
PRPF6-201ENST00000266079 HSFY1Q96LI6 401 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 NKX2-4Q9H2Z4 354 aa12.89□□□□□ -0.35
PRPF6-201ENST00000266079 PRRG1O14668 218 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 VILLO15195 856 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PIAS1O75925 651 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 GABRB2P47870 512 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 DLG1Q12959 904 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 C1QTNF12Q5T7M4 302 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 LPCAT4Q643R3 524 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.357e-8■□□□□ 10
PRPF6-201ENST00000266079 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PI4K2BG5E9Z4 385 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 KLF11O14901 512 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 ZBED1O96006 694 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 AQP4P55087 323 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 NME3Q13232 169 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 MMEL1Q495T6 779 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 ANKRD20A4Q4UJ75 823 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 RNF111Q6ZNA4 994 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PPP1R14BQ96C90 147 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 SUDS3Q9H7L9 328 aaPredicted RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 DRG1Q9Y295 367 aaKnown RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 GOLGA8MH3BSY2 632 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PGM3O95394 542 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 EFEMP2O95967 443 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 NCAM1P13591 858 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms