RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TFEBP19484 476 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 CCNA1P78396 465 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 ITKQ08881 620 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 KYAT1Q16773 422 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 PKDCCQ504Y2 493 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 NOTUMQ6P988 496 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 B3GALNT2Q8NCR0 500 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 DCUN1D1Q96GG9 259 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 FAM192AQ9GZU8 254 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 SMIM28A0A1B0GU29 152 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 FZD9O00144 591 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 MOCS2O96007 188 aaPredicted RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 LIMK2P53671 638 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 MAP7Q14244 749 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 CYP2R1Q6VVX0 501 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 KCNN1Q92952 543 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 WNT8BQ93098 351 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
LIG1-201ENST00000263274 ZDHHC2Q9UIJ5 367 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 NUDT5Q9UKK9 219 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 CDYLQ9Y232 598 aa12.87□□□□□ -0.35
LIG1-201ENST00000263274 NRP1O14786 923 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 CLPTM1O96005 669 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
LIG1-201ENST00000263274 NOS2P35228 1153 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 CHN2P52757 468 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 NME5P56597 212 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 PRPSAP1Q14558 356 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 DGKDQ16760 1214 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 PAOXQ6QHF9 649 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 STRADAQ7RTN6 431 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
LIG1-201ENST00000263274 ZFP42Q96MM3 310 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 Q9H521 79 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 XPR1Q9UBH6 696 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 HDAC3O15379 428 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 CNMDO75829 334 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 MPP1Q00013 466 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 C16orf89Q6UX73 402 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 EME1Q96AY2 570 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 PHF21BQ96EK2 531 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 FTHL17Q9BXU8 183 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 WDR41Q9HAD4 459 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 RGSL1A5PLK6 1076 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 TIMM44O43615 452 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 JUNP05412 331 aaKnown RBP12.86□□□□□ -0.35
LIG1-201ENST00000263274 ARSAP15289 507 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ADRA1BP35368 520 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 GK3PQ14409 553 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 DCAF4L1Q3SXM0 396 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 STEAP4Q687X5 459 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 EPGNQ6UW88 154 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 HSFY1Q96LI6 401 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
LIG1-201ENST00000263274 PRKCGP05129 697 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 MYL4P12829 197 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
LIG1-201ENST00000263274 COG7P83436 770 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 CSHL1Q14406 222 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 FAM187BQ17R55 369 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 INSCQ1MX18 579 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 FAM219BQ5XKK7 198 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 RBM44Q6ZP01 1051 aaKnown RBP12.85□□□□□ -0.35
LIG1-201ENST00000263274 OSTM1Q86WC4 334 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 NXNL1Q96CM4 212 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 SNX27Q96L92 541 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
LIG1-201ENST00000263274 CCDC167Q9P0B6 97 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
LIG1-201ENST00000263274 DNAH12Q6ZR08 3092 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms