RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 KRT84Q9NSB2 600 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 IRF6O14896 467 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MPZL2O60487 215 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NFATC1O95644 943 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ENO1P06733 434 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PIK3R1P27986 724 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PCYT1AP49585 367 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CYP51A1Q16850 503 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 STXBP5Q5T5C0 1151 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 AAGABQ6PD74 315 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MTSS1LQ765P7 747 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 GPR142Q7Z601 462 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TDRD5Q8NAT2 981 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 THRSPQ92748 146 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PTCD3Q96EY7 689 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CSPG4P5Q96PW8 444 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TEFMQ96QE5 360 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SPASTQ9UBP0 616 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PHTF1Q9UMS5 762 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 A0A0B4J269 797 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM88BA6NKF7 163 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NQO1P15559 274 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NEK3P51956 506 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 GUCY1A3Q02108 690 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RGS1Q08116 209 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DPYSQ14117 519 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ABHD15Q6UXT9 468 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ACSS3Q9H6R3 686 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 AASDHPPTQ9NRN7 309 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MOSPD1Q9UJG1 213 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RUVBL2Q9Y230 463 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 AKAP10O43572 662 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ST13P50502 369 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ATXN3P54252 364 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LBX2Q6XYB7 198 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLC26A9Q7LBE3 791 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SZRD1Q7Z422 152 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ADCK1Q86TW2 530 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CDR2LQ86X02 465 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 UNC5BQ8IZJ1 945 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC33Q8N5R6 958 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KAT2BQ92831 832 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KLRG1Q96E93 195 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FUT8Q9BYC5 575 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC90BQ9GZT6 254 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 RACGAP1Q9H0H5 632 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM245Q9H330 911 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GRM6O15303 877 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FOXN1O15353 648 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EPN2O95208 641 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TGFBR2P37173 567 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TALDO1P37837 337 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PIK3CBP42338 1070 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LGALS3BPQ08380 585 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ZNHIT3Q15649 155 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 RP9Q8TA86 221 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NTAN1Q96AB6 310 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 THAP11Q96EK4 314 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM45AQ9NWC5 275 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CALML5Q9NZT1 146 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SH3BP4Q9P0V3 963 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KLHL3Q9UH77 587 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ITM2BQ9Y287 266 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ZBTB12Q9Y330 459 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 H3BNX3 289 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 AVILO75366 819 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DARSP14868 501 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NDUFS1P28331 727 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 BOP1Q14137 746 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FIBCD1Q8N539 461 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 BHLHE22Q8NFJ8 381 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EMID1Q96A84 441 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ACSF2Q96CM8 615 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJC19Q96DA6 116 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DACH2Q96NX9 599 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KCTD14Q9BQ13 255 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CDC42EP4Q9H3Q1 356 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LAMB2P55268 1798 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DTNBO60941 627 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ECDO95905 644 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 RHOQP17081 205 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ENDOUP21128 410 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLC26A3P40879 764 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CLCN3P51790 818 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ACTN3Q08043 901 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EPC2Q52LR7 807 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SETMARQ53H47 684 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LUZP2Q86TE4 346 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 HOPXQ9BPY8 73 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LRRC4BQ9NT99 713 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FAM198AQ9UFP1 575 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TIAM2Q8IVF5 1701 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ONECUT3O60422 494 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 AGR2O95994 175 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SELPP16109 830 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LPOP22079 712 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 STAT5AP42229 794 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GPR15P49685 360 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms