RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KRT73Q86Y46 540 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 IZUMO1Q8IYV9 350 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 BHLHE22Q8NFJ8 381 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 TISP43B9A030 160 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 TUFMP49411 452 aaKnown RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 CCR4P51679 360 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 TMEM86AQ8N2M4 240 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 TAS2R14Q9NYV8 317 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 CHURC1-FNTBB4DL54 471 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SNPHO15079 494 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 IL6P05231 212 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SERPINA4P29622 427 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 NTSP30990 170 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF135P52742 658 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 TAF13Q15543 124 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 TRAPPC5Q8IUR0 188 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 LENG9Q96B70 501 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 ULBP1Q9BZM6 244 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 REEP1Q9H902 201 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SAR1AQ9NR31 198 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SALL1Q9NSC2 1324 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 ANKDD1BA6NHY2 528 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 PIGNO95427 931 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 PROCP04070 461 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 GSTM5P46439 218 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 FAM187BQ17R55 369 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 C16orf46Q6P387 395 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 PSTKQ8IV42 348 aaKnown RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 MAP4K3Q8IVH8 894 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 FAM20CQ8IXL6 584 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 CENPIQ92674 756 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 SLC35C1Q96A29 364 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 POLE3Q9NRF9 147 aa11.71□□□□□ -0.53
LAMA4-201ENST00000230538 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
LAMA4-201ENST00000230538 GUCY1B2O75343 617 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 OR6B1O95007 311 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ARMC3Q5W041 872 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 TPGS1Q6ZTW0 290 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ETNPPLQ8TBG4 499 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 TNPO3Q9Y5L0 923 aaKnown RBP11.71□□□□□ -0.54
LAMA4-201ENST00000230538 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 PNMA8CA0A1B0GUJ8 204 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 CHADO15335 359 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 CRATP43155 626 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 SKP1P63208 163 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 CXCL9Q07325 125 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ACSM2AQ08AH3 577 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ACSM2BQ68CK6 577 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.54
LAMA4-201ENST00000230538 RTL3Q8N8U3 475 aaKnown RBP11.71□□□□□ -0.54
LAMA4-201ENST00000230538 IL22Q9GZX6 179 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ALG9Q9H6U8 611 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 ZMYM2Q9UBW7 1377 aa11.71□□□□□ -0.54
LAMA4-201ENST00000230538 EML1O00423 815 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 FGF10O15520 208 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PDE9AO76083 593 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 HOXB8P17481 243 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PSMB4P28070 264 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PKNOX1P55347 436 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PTSQ03393 145 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PFKFB4Q16877 469 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PCID2Q5JVF3 399 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 FBXL19Q6PCT2 694 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 PRDM16Q9HAZ2 1276 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SAE1Q9UBE0 346 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 KLQ9UEF7 1012 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 F8VP50 259 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ADRA1DP25100 572 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ACVR2BQ13705 512 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SPANXN2Q5MJ10 180 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 WDR59Q6PJI9 974 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 DET1Q7L5Y6 550 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 QRFPRQ96P65 431 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 RHBGQ9H310 441 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 TMEM51Q9NW97 253 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 TMEM216Q9P0N5 145 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 GNPTGQ9UJJ9 305 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ANAPC2Q9UJX6 822 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-201ENST00000230538 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
LAMA4-201ENST00000230538 CXCL11O14625 94 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms