RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 AGAP2Q99490 1192 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 NFKBIZQ9BYH8 718 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLHL25Q9H0H3 589 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ELP3Q9H9T3 547 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 RBPJLQ9UBG7 517 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 VPS51Q9UID3 782 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARHGAP26Q9UNA1 814 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 DMTF1Q9Y222 760 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 NUP205Q92621 2012 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 E9PBE3 544 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLHL41O60662 606 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 PEX14O75381 377 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 SERPINE1P05121 402 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 LGALS2P05162 132 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM58BPP0C7Q3 252 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 RALBP11234 206 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 TUFMP49411 452 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 GSTM4Q03013 218 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF781Q8N8C0 355 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC35B4Q969S0 331 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 HEPHQ9BQS7 1158 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDH22Q9UJ99 828 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ATP9BO43861 1147 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZBTB11O95625 1053 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 PORP16435 677 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ITGAXP20702 1163 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 RPL10P27635 214 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 PTPN9P43378 593 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 NR2C2P49116 596 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 RABGGTBP53611 331 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 IRF9Q00978 393 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 TBCCQ15814 346 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC9B1Q4ZJI4 515 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 PGM2L1Q6PCE3 622 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 NUP93Q8N1F7 819 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 DDHD1Q8NEL9 900 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 USP13Q92995 863 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 CENPOQ9BU64 300 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 GPAMQ9HCL2 828 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 TRPC7Q9HCX4 862 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 TIMMDC1Q9NPL8 285 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 RSL24D1Q9UHA3 163 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 DCDC2Q9UHG0 476 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 POMPQ9Y244 141 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 GOLGA8TH3BQL2 631 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 CSPG5O95196 566 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ETFBP38117 255 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCR10P46092 362 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ABCE1P61221 599 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ITGADQ13349 1161 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 KIZQ2M2Z5 673 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 LDLRAP1Q5SW96 308 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 DEFB106AQ8N104 65 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF567Q8N184 647 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 DCLK2Q8N568 766 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 OR52K1Q8NGK4 314 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZSCAN18Q8TBC5 510 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDKL2Q92772 493 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM149B1Q96BN6 582 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 EIF2AQ9BY44 585 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 NUF2Q9BZD4 464 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 PRDM12Q9H4Q4 367 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 COG4Q9H9E3 785 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 SNX15Q9NRS6 342 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 MORF4L1Q9UBU8 362 aa9.57□□□□□ -0.88
HLA-DOA-201ENST00000229829 BRCA2P51587 3418 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GOLGA8QA0A0J9YX86 632 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GOLGA8OA6NCC3 632 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GOLGA8NF8WBI6 632 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLHL2O95198 593 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 TNFAIP8O95379 198 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CNTFP26441 200 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 RGS19P49795 217 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC26A2P50443 739 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PKNOX1P55347 436 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 SULT2A1Q06520 285 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARHGAP1Q07960 439 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 KCTD2Q14681 263 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 EML3Q32P44 896 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PERM1Q5SV97 790 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 RARS2Q5T160 578 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CYS1Q717R9 158 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC26A9Q7LBE3 791 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 LINC01465Q8N7H1 131 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GRIN3AQ8TCU5 1115 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 ATP2A3Q93084 1043 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PPWD1Q96BP3 646 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 OR52B2Q96RD2 323 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 GPATCH1Q9BRR8 931 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAIMQ9NVQ4 179 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 DNAJC25-GNG10A0A024R161 153 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCDC78A2IDD5 438 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 TMX2-CTNND1H3BSU7 103 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCNT2O60583 730 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 AMHP03971 560 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 CPA3P15088 417 aa9.56□□□□□ -0.88
HLA-DOA-201ENST00000229829 PGAM1P18669 254 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms