RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 C1orf146Q5VVC0 180 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 PKN3Q6P5Z2 889 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 ZYG11AQ6WRX3 759 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 CNTN4Q8IWV2 1026 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 UROC1Q96N76 676 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 TBL1YQ9BQ87 522 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 OSBPL1AQ9BXW6 950 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 OXSMQ9NWU1 459 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 SHROOM3Q8TF72 1996 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 SCN10AQ9Y5Y9 1956 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 MANSC4A6NHS7 340 aaPredicted RBP22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 M0QZQ0 153 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 CHRNA1P02708 482 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 AFF1P51825 1210 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 GEMP55040 296 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 KLC1Q07866 573 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 C17orf99Q6UX52 265 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 ATG14Q6ZNE5 492 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 SERINC5Q86VE9 423 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 ZC3HC1Q86WB0 502 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 THEM5Q8N1Q8 247 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 ATPAF2Q8N5M1 289 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 CNTD1Q8N815 330 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 AZIN2Q96A70 460 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 IL12RB2Q99665 862 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 ABCC13Q9NSE7 274 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 DONSONQ9NYP3 566 aa22.36■■□□□ 1.17
SMARCD2-201ENST00000225742 IRAK2O43187 625 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 CABYRO75952 493 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 ANPEPP15144 967 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 BDNFP23560 247 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 NUMBP49757 651 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 BTKQ06187 659 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 LBRQ14739 615 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 LRRC49Q8IUZ0 686 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 TNS4Q8IZW8 715 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 ACTRT2Q8TDY3 377 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 ATXN7L3BQ96GX2 97 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 ILKAPQ9H0C8 392 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 GLOD4Q9HC38 313 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 FNIP2Q9P278 1114 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 NEU3Q9UQ49 428 aa22.35■■□□□ 1.17
SMARCD2-201ENST00000225742 TPH1P17752 444 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 SLC12A1Q13621 1099 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 SMAD1Q15797 465 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 GDF6Q6KF10 455 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 TIGD7Q6NT04 549 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 POTEHQ6S545 545 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 CTU1Q7Z7A3 348 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 DTX3LQ8TDB6 740 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 FAM136AQ96C01 138 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 CELF6Q96J87 481 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 APOL2Q9BQE5 337 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 FAM167BQ9BTA0 163 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 COG4Q9H9E3 785 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 CAB39LQ9H9S4 337 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 SLC39A10Q9ULF5 831 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 RAP2CQ9Y3L5 183 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 MATN3O15232 486 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 SLC22A2O15244 555 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 IRF9Q00978 393 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 ASPHQ12797 758 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 GRIK3Q13003 919 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 GRM3Q14832 879 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 GNASQ5JWF2 1037 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 MANEALQ5VSG8 457 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 LIPMQ5VYY2 423 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 RWDD4Q6NW29 188 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 PGM2L1Q6PCE3 622 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 ARHGAP12Q8IWW6 846 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 KIRREL3Q8IZU9 778 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 TDRD5Q8NAT2 981 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 PPHLN1Q8NEY8 458 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 MICAL1Q8TDZ2 1067 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 JADE3Q92613 823 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 GATA5Q9BWX5 397 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 C1QTNF1Q9BXJ1 281 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 ACE2Q9BYF1 805 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 RHOBTB2Q9BYZ6 727 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 DRC3Q9H069 523 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 SMOC2Q9H3U7 446 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 ENTPD7Q9NQZ7 604 aa22.34■■□□□ 1.17
SMARCD2-201ENST00000225742 MYADML2A6NDP7 307 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 SLCO1B7G3V0H7 640 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 SNUPNO95149 360 aaKnown RBP22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 TYMPP19971 482 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 NRG1Q02297 640 aaPredicted RBP22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 PPP2R5DQ14738 602 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 CAPRIN2Q6IMN6 1127 aaKnown RBP22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 NAPRTQ6XQN6 538 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 OTOP3Q7RTS5 596 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 ZNF781Q8N8C0 355 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 NUP205Q92621 2012 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 CLPTM1LQ96KA5 538 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 PGLYRP2Q96PD5 576 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 NDE1Q9NXR1 346 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 VTI1BQ9UEU0 232 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 PTPRDP23468 1912 aa22.33■■□□□ 1.16
SMARCD2-201ENST00000225742 DFFAO00273 331 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms