RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TMEM253P0C7T8 217 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 GPD1P21695 349 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 MZF1P28698 734 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 MAGEA1P43355 309 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 STK19P49842 368 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 SULT1E1P49888 294 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 VASPP50552 380 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 GALCP54803 685 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 MAMLD1Q13495 774 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 ELAVL3Q14576 367 aaKnown RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 KIF19Q2TAC6 998 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 SLC25A52Q3SY17 297 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 DBX2Q6ZNG2 339 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 KDF1Q8NAX2 398 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 PTPRN2Q92932 1015 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 IGSF8Q969P0 613 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 RPRD1AQ96P16 312 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 NPY6RQ99463 290 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 OMDQ99983 421 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 THAP2Q9H0W7 228 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 NEUROG2Q9H2A3 272 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 PCOLCE2Q9UKZ9 415 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 NENFQ9UMX5 172 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 MSRB2Q9Y3D2 182 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 EPN1Q9Y6I3 576 aaPredicted RBP18.48■□□□□ 0.55
PFN1-201ENST00000225655 PLXNA2O75051 1894 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 TMEM131Q92545 1883 aa18.48■□□□□ 0.55
PFN1-201ENST00000225655 FRYQ5TBA9 3013 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 A0A1W2PP55 124 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 FAM221BA6H8Z2 402 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 LRRC72A6NJI9 287 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 M0QYT0 321 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ARHGAP6O43182 974 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ATMINO43313 823 aaPredicted RBP18.47■□□□□ 0.55
PFN1-201ENST00000225655 PAGE1O75459 146 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 RNASEH2AO75792 299 aaKnown RBP18.47■□□□□ 0.55
PFN1-201ENST00000225655 LCA5LO95447 670 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ADH1BP00325 375 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 C5AR1P21730 350 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 SLC8A1P32418 973 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 CCDC173Q0VFZ6 552 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 C5orf22Q49AR2 442 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 OTUD1Q5VV17 481 aaPredicted RBP18.47■□□□□ 0.55
PFN1-201ENST00000225655 NCEH1Q6PIU2 408 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 RAB44Q7Z6P3 723 aaPredicted RBP18.47■□□□□ 0.55
PFN1-201ENST00000225655 GLRX5Q86SX6 157 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 LRRC8AQ8IWT6 810 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 STK40Q8N2I9 435 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 SETD7Q8WTS6 366 aaKnown RBP18.47■□□□□ 0.55
PFN1-201ENST00000225655 FRS2Q8WU20 508 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 RXFP2Q8WXD0 754 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ALG14Q96F25 216 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 PIGVQ9NUD9 493 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 CTTNBP2NLQ9P2B4 639 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 UVRAGQ9P2Y5 699 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 KLK13Q9UKR3 277 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 VANGL2Q9ULK5 521 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ANKRD6Q9Y2G4 727 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 SNX11Q9Y5W9 270 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 HS3ST4Q9Y661 456 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 IGF2RP11717 2491 aa18.47■□□□□ 0.55
PFN1-201ENST00000225655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.46■□□□□ 0.55
PFN1-201ENST00000225655 C10orf142B7Z368 130 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 FLRT2O43155 660 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 CYP1A2P05177 515 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 GOT1P17174 413 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 RFC1P35251 1148 aaPredicted RBP18.46■□□□□ 0.55
PFN1-201ENST00000225655 FLT3P36888 993 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 PTPN9P43378 593 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 PSMD8P48556 350 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 CXCR3P49682 368 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 RACK1P63244 317 aaKnown RBP18.46■□□□□ 0.55
PFN1-201ENST00000225655 DEUP1Q05D60 604 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 ZNF177Q13360 481 aaPredicted RBP18.46■□□□□ 0.55
PFN1-201ENST00000225655 BRMS1LQ5PSV4 323 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 RHOT2Q8IXI1 618 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 CHCHD4Q8N4Q1 142 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 AADATQ8N5Z0 425 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 EMC1Q8N766 993 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 OR2T34Q8NGX1 318 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 NT5C3BQ969T7 300 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 PGAP3Q96FM1 320 aaPredicted RBP18.46■□□□□ 0.55
PFN1-201ENST00000225655 NCAPGQ9BPX3 1015 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 FEM1AQ9BSK4 669 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 NUP85Q9BW27 656 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 TBC1D30Q9Y2I9 924 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 PCDHA13Q9Y5I0 950 aa18.46■□□□□ 0.55
PFN1-201ENST00000225655 CABIN1Q9Y6J0 2220 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 TP53BP1Q12888 1972 aaPredicted RBP18.45■□□□□ 0.54
PFN1-201ENST00000225655 A0A1W2PPC4 97 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 TCRBV5S1A1TA0A578 114 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 FAM47DPA6NHR8 397 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 C2CD4BA6NLJ0 364 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 CLDN11O75508 207 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 FTH1P19P0C7X4 201 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 PSMA2P25787 234 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 IRAK1P51617 712 aa18.45■□□□□ 0.54
PFN1-201ENST00000225655 ZNF143P52747 638 aaPredicted RBP18.45■□□□□ 0.54
PFN1-201ENST00000225655 SUZ12Q15022 739 aaKnown RBP18.45■□□□□ 0.54
PFN1-201ENST00000225655 PPP1R15BQ5SWA1 713 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms