RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CD58P19256 250 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 POLR2CP19387 275 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 AOC1P19801 751 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 RFC1P35251 1148 aaPredicted RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 TXNL4AP83876 142 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 CCNG2Q16589 344 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 PERM1Q5SV97 790 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 ATAD3BQ5T9A4 648 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 CHSY1Q86X52 802 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 MRPL47Q9HD33 250 aaKnown RBP13.87□□□□□ -0.19
GABPB1-201ENST00000220429 TRAF6Q9Y4K3 522 aa13.87□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF839A8K0R7 811 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 B8ZZF3 427 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 B4GALT5O43286 388 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 NUAK1O60285 661 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 SERPINA6P08185 405 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 PPP6R3Q5H9R7 873 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-201ENST00000220429 PRR23CQ6ZRP0 262 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 ANKS1BQ7Z6G8 1248 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 CDR2LQ86X02 465 aaPredicted RBP13.86□□□□□ -0.19
GABPB1-201ENST00000220429 FBXW8Q8N3Y1 598 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 KBTBD7Q8WVZ9 684 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 CYP4F11Q9HBI6 524 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 OLAHQ9NV23 265 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 NDFIP2Q9NV92 336 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 SLC24A2Q9UI40 661 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 RIMS3Q9UJD0 308 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 SLC8A2Q9UPR5 921 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 ST14Q9Y5Y6 855 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 IKBKGQ9Y6K9 419 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 ACKR2O00590 384 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 KCNJ13O60928 360 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 JRKO75564 520 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 TXNP10599 105 aaKnown RBP13.86□□□□□ -0.19
GABPB1-201ENST00000220429 KRT10P13645 584 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 CLCN3P51790 818 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 OTUD4Q01804 1114 aaKnown RBP13.86□□□□□ -0.19
GABPB1-201ENST00000220429 GALNT2Q10471 571 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 TRAF2Q12933 501 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 NPTX1Q15818 432 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 PGS1Q32NB8 556 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 GPR107Q5VW38 600 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 EEF1DP3Q658K8 133 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 KRT80Q6KB66 452 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 MPZL3Q6UWV2 235 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 THNSL1Q8IYQ7 743 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 TNIP2Q8NFZ5 429 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 MRPL9Q9BYD2 267 aaKnown RBP13.86□□□□□ -0.19
GABPB1-201ENST00000220429 NIF3L1Q9GZT8 377 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 FZD8Q9H461 694 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 MINDY3Q9H8M7 445 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 SAYSD1Q9NPB0 183 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
GABPB1-201ENST00000220429 ARHGEF37A1IGU5 675 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 INO80B-WBP1J3KQ70 363 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 ENPP3O14638 875 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 TLR3O15455 904 aaKnown RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 PSTPIP1O43586 416 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 SEC24DO94855 1032 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 OSBPP22059 807 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 MMP8P22894 467 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 IL32P24001 234 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GRK2P25098 689 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 DCKP27707 260 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 OSTNP61366 133 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 RPL7AP62424 266 aaKnown RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 TFAMQ00059 246 aaKnown RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GALNT1Q10472 559 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 STX3Q13277 289 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 KLF1Q13351 362 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 STK11Q15831 433 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 INSCQ1MX18 579 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 ATF7IP2Q5U623 682 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 AKAP14Q86UN6 197 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 CCDC33Q8N5R6 958 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GALNT6Q8NCL4 622 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 ACDQ96AP0 544 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 RILPQ96NA2 401 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 A0A087WXM4 84 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 TRIM64BA6NI03 449 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 RALAP11233 206 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GJA5P36382 358 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 COPAP53621 1224 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 PDIA2Q13087 525 aaKnown RBP13.85□□□□□ -0.19
GABPB1-201ENST00000220429 COL19A1Q14993 1142 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 UBE2UQ5VVX9 321 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 EFCAB12Q6NXP0 572 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms