RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 ERCC2P18074 760 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PIK3R1P27986 724 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PMLP29590 882 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 FDFT1P37268 417 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 MATKP42679 507 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 MTTPP55157 894 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 MAP3K7CLP57077 242 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 ARL13AQ5H913 290 aaPredicted RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 ARPINQ7Z6K5 226 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 SPATA22Q8NHS9 363 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 TMA16Q96EY4 203 aaKnown RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 SNX27Q96L92 541 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PHF12Q96QT6 1004 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 KCNK16Q96T55 309 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 MLPHQ9BV36 600 aaPredicted RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 NMRAL1Q9HBL8 299 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 ARHGAP26Q9UNA1 814 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PCDHB12Q9Y5F1 795 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 NEMP2A6NFY4 417 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PEX1O43933 1283 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 NFKB1P19838 968 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 RGS2P41220 211 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 GRIA4P48058 902 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 ADAM17P78536 824 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 DEUP1Q05D60 604 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 CTBP1Q13363 440 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 NOTUMQ6P988 496 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 DENND6AQ8IWF6 608 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 DSELQ8IZU8 1212 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 DCUN1D1Q96GG9 259 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 SEMA6AQ9H2E6 1030 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 TMEM30AQ9NV96 361 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 PIN4Q9Y237 131 aaKnown RBP16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 DTNAQ9Y4J8 743 aa16.12■□□□□ 0.17
SNAPC1-201ENST00000216294 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 RTN3O95197 1032 aaPredicted RBP16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ZFXP17010 805 aaPredicted RBP16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 DESP17661 470 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 GRK2P25098 689 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 CNTFP26441 200 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 CPT1AP50416 773 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 BCAT1P54687 386 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 CRHR2Q13324 411 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 CEACAM7Q14002 265 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 AAGABQ6PD74 315 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 UGT2A3Q6UWM9 527 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ARHGAP36Q6ZRI8 547 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 GPRIN1Q7Z2K8 1008 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 SDCCAG8Q86SQ7 713 aaPredicted RBP16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 SLC41A1Q8IVJ1 513 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ST13P4Q8IZP2 240 aaPredicted RBP16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 CCNYL1Q8N7R7 359 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ICA1LQ8NDH6 482 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 PIP4K2CQ8TBX8 421 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ACMSDQ8TDX5 336 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ATXN3LQ9H3M9 355 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 ETAA1Q9NY74 926 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 GMPR2Q9P2T1 348 aaKnown RBP16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 HAS3O00219 553 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 FBXO21O94952 628 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 FGFR3P22607 806 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 KIAA0319Q5VV43 1072 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 KCNMB4Q86W47 210 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 EPAS1Q99814 870 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
SNAPC1-201ENST00000216294 YJEFN3A6XGL0 299 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 KPNA7A9QM74 516 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 TRPA1O75762 1119 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 LIMK2P53671 638 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 MPP1Q00013 466 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 CDKL1Q00532 357 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 SNX17Q15036 470 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 PDK1Q15118 436 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 SLC25A52Q3SY17 297 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 METTL25Q8N6Q8 603 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 PCDH20Q8N6Y1 951 aaKnown RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 BHLHE22Q8NFJ8 381 aaPredicted RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 VPS39Q96JC1 886 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 ZIC5Q96T25 663 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 CPNE1Q99829 537 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 GRIP2Q9C0E4 1043 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 DDX18Q9NVP1 670 aaKnown RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 RUVBL2Q9Y230 463 aaKnown RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 MTF2Q9Y483 593 aaPredicted RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 hCG_2014768A0A024R1R8 64 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 MT-CYBP00156 380 aaPredicted RBP16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 FYNP06241 537 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 SLC10A3P09131 477 aa16.1■□□□□ 0.17
SNAPC1-201ENST00000216294 HNRNPLP14866 589 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms