RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CCDC15Q0P6D6 951 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 PRAMEF14Q5SWL7 426 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 PIP5KL1Q5T9C9 394 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 Q6ZVU0 165 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.2
ERCC1-201ENST00000013807 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 PDCD7Q8N8D1 485 aaKnown RBP16.27■□□□□ 0.2
ERCC1-201ENST00000013807 DCAF4L2Q8NA75 395 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 OR2A12Q8NGT7 310 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 RETREG1Q9H6L5 497 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 VPS51Q9UID3 782 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 LHX6Q9UPM6 363 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-201ENST00000013807 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
ERCC1-201ENST00000013807 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 TRABD2BA6NFA1 517 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 PRAMEF26H0Y7S4 382 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 ENC1O14682 589 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 LDOC1O95751 146 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 ITGAVP06756 1048 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 CTSLP07711 333 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 FLT3P36888 993 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 GGCXP38435 758 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 SLC20A2Q08357 652 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 ILKQ13418 452 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 SETMARQ53H47 684 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 C6orf118Q5T5N4 469 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 TRNP1Q6NT89 227 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 LRRC31Q6UY01 552 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 NOP9Q86U38 636 aaKnown RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 ZNF677Q86XU0 584 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 CACTIN-AS1Q8N1I8 211 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 MDM1Q8TC05 714 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 EPS8L1Q8TE68 723 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 CCDC114Q96M63 670 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 TBCBQ99426 244 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 MUC3BQ9H195 1237 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 SCUBE2Q9NQ36 999 aa16.26■□□□□ 0.19
ERCC1-201ENST00000013807 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
ERCC1-201ENST00000013807 LOC400499M0QZD8 3231 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 A0A0D9SEW6 157 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 F8VZ95 297 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 PLK4O00444 970 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 SNAP91O60641 907 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 ZNF821O75541 412 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-201ENST00000013807 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 RHOCP08134 193 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 ZNF18P17022 549 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 CHRNA3P32297 505 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 NUMBP49757 651 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 SULT1E1P49888 294 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 NOMO3P69849 1222 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 NRG1Q02297 640 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-201ENST00000013807 BNIP3Q12983 259 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 RAPGEF1Q13905 1077 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 STAT4Q14765 748 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 TCP11X2Q5H9J9 407 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 FAM102AQ5T9C2 384 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-201ENST00000013807 DHRS13Q6UX07 377 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 ATP11CQ8NB49 1132 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 CNDP2Q96KP4 475 aaKnown RBP16.25■□□□□ 0.19
ERCC1-201ENST00000013807 HDAC8Q9BY41 377 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
ERCC1-201ENST00000013807 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
ERCC1-201ENST00000013807 GOLGA8CPA6NN73 597 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 SMAD6O43541 496 aaKnown RBP16.24■□□□□ 0.19
ERCC1-201ENST00000013807 PRNPP04156 253 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-201ENST00000013807 OR1E1P30953 314 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 ACADVLP49748 655 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 PLPP6Q8IY26 295 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 MSANTD4Q8NCY6 345 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 FAM174AQ8TBP5 190 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
ERCC1-201ENST00000013807 CEP44Q9C0F1 390 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 MPP6Q9NZW5 540 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
ERCC1-201ENST00000013807 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
ERCC1-201ENST00000013807 K7ERQ8 282 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 RFPL3O75679 317 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 MMP8P22894 467 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 RRM1P23921 792 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 MAT2AP31153 395 aaKnown RBP16.23■□□□□ 0.19
ERCC1-201ENST00000013807 ZNF284Q2VY69 593 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 RETSATQ6NUM9 610 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 HORMAD1Q86X24 394 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 EID2Q8N6I1 236 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 RFFLQ8WZ73 363 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 ARRDC3Q96B67 414 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 KLHDC7BQ96G42 594 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 ZYG11BQ9C0D3 744 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 TMPRSS4Q9NRS4 437 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 SNX10Q9Y5X0 201 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 SHROOM3Q8TF72 1996 aa16.23■□□□□ 0.19
ERCC1-201ENST00000013807 PTPRQQ9UMZ3 2332 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms