RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	SRC	P12931	536 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	GOT1	P17174	413 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	TAS2R40	P59535	323 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	TCEAL1	Q15170	157 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	DLG2	Q15700	870 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	BOLA3	Q53S33	107 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	RAD9B	Q6WBX8	426 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	CACUL1	Q86Y37	369 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	CCDC170	Q8IYT3	715 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	SIPA1	Q96FS4	1042 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	C2orf49	Q9BVC5	232 aa	Predicted RBP	27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	ATP13A1	Q9HD20	1204 aa		27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	EP300	Q09472	2414 aa	Predicted RBP	27.32	■■□□□ 1.96
VEGFA-231	ENST00000640499	EDDM13	A0A1B0GTR0	161 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	EIF3CL	B5ME19	914 aa	Known RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	EEF2K	O00418	725 aa	Known RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	ZNF821	O75541	412 aa	Predicted RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	HTR7	P34969	479 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	MAGEA1	P43355	309 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	TPI1	P60174	286 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	KRT83	P78385	493 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	DPYSL2	Q16555	572 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	ATP13A4	Q4VNC1	1196 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	PPP6R3	Q5H9R7	873 aa	Predicted RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	UMODL1-AS1	Q8N2C9	162 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	PRCC	Q92733	491 aa	Predicted RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	EIF3C	Q99613	913 aa	Known RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	MAGEH1	Q9H213	219 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	SLC25A13	Q9UJS0	675 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	CYP8B1	Q9UNU6	501 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	REXO2	Q9Y3B8	237 aa	Known RBP	27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	THADA	Q6YHU6	1953 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	NUP205	Q92621	2012 aa		27.31	■■□□□ 1.96
VEGFA-231	ENST00000640499	CBX4	O00257	560 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	ZBTB24	O43167	697 aa	Predicted RBP	27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	IGLV3-19	P01714	112 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	TPMT	P51580	245 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	ARSE	P51690	589 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	DPYS	Q14117	519 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	PMS2CL	Q68D20	193 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	LAIR1	Q6GTX8	287 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	RFX8	Q6ZV50	586 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	TMTC1	Q8IUR5	882 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	STK40	Q8N2I9	435 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	TEKT4	Q8WW24	435 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	HSPH1	Q92598	858 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	LRRC19	Q9H756	370 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	CATSPERB	Q9H7T0	1116 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	IMPACT	Q9P2X3	320 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	PCDHA13	Q9Y5I0	950 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	EPN1	Q9Y6I3	576 aa	Predicted RBP	27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	FAM186A	A6NE01	2351 aa		27.3	■■□□□ 1.96
VEGFA-231	ENST00000640499	ZNF292	O60281	2723 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	FGF10	O15520	208 aa	Predicted RBP	27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	RAMP2	O60895	175 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	ZNF217	O75362	1048 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	ERCC2	P18074	760 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	TGM1	P22735	817 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	IL4R	P24394	825 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	HCAR3	P49019	387 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	POLD3	Q15054	466 aa	Predicted RBP	27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	IL31	Q6EBC2	164 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	POLN	Q7Z5Q5	900 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	NETO2	Q8NC67	525 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	FAM71B	Q8TC56	605 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	RFFL	Q8WZ73	363 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	TSC1	Q92574	1164 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	FBRS	Q9HAH7	460 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	MFHAS1	Q9Y4C4	1052 aa		27.29	■■□□□ 1.96
VEGFA-231	ENST00000640499	NNMT	P40261	264 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	MESD	Q14696	234 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	ACCSL	Q4AC99	568 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	AFMID	Q63HM1	303 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499		Q6ZVU0	165 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	ATP11C	Q8NB49	1132 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	RUBCN	Q92622	972 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	HMCES	Q96FZ2	354 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	PCDH18	Q9HCL0	1135 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	RAB23	Q9ULC3	237 aa		27.28	■■□□□ 1.96
VEGFA-231	ENST00000640499	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	RCCD1	A6NED2	376 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	TMEM110-MUSTN1	A8MSY1	372 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	RASA4B	C9J798	803 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	RASA4	O43374	803 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	KDELR3	O43731	214 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	NDUFA10	O95299	355 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	CD48	P09326	243 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	MAN1A1	P33908	653 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	SERPINH1	P50454	418 aa	Known RBP	27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	BYSL	Q13895	437 aa	Known RBP	27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	NUMA1	Q14980	2115 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	MMAA	Q8IVH4	418 aa	Known RBP	27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	ARHGAP12	Q8IWW6	846 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	TP53INP2	Q8IXH6	220 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	RHOT2	Q8IXI1	618 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	TMEFF1	Q8IYR6	380 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	DEFB119	Q8N690	84 aa		27.27	■■□□□ 1.96
VEGFA-231	ENST00000640499	NPW	Q8N729	165 aa		27.27	■■□□□ 1.96

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