RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.33e-9■■■■■ 48.2
SPTAN1-211ENST00000625980 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SAYSD1Q9NPB0 183 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 PLK2Q9NYY3 685 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SHROOM3Q8TF72 1996 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SOBPA7XYQ1 873 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 AVILO75366 819 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 GLDCP23378 1020 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 GRIA1P42261 906 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 FAM193AP78312 1265 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF77Q15935 545 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TTC39BQ5VTQ0 682 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 EXOC4Q96A65 974 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 PABPC5Q96DU9 382 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 C9orf72Q96LT7 481 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 VAT1Q99536 393 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 MAGEH1Q9H213 219 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 GBA3Q9H227 469 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 SP110Q9HB58 689 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 ACTL7AQ9Y615 435 aa13.16□□□□□ -0.3
SPTAN1-211ENST00000625980 REV3LO60673 3130 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 ILVBLA1L0T0 632 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 E7EVH7 732 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 H0Y626 953 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 AGPSO00116 658 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 PRAMEF11O60813 436 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 HLA-DQB2P05538 268 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 TPSB2P20231 275 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 FSHRP23945 695 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 MAGEA4P43358 317 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 RGS19P49795 217 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 ARL4CP56559 192 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 SLC10A7Q0GE19 358 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 USP4Q13107 963 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 OLIG2Q13516 323 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 HIF1AQ16665 826 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 KYNUQ16719 465 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 SETD3Q86TU7 594 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 OR2W6PQ8NHA6 318 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 UHMK1Q8TAS1 419 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 DDI1Q8WTU0 396 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 LRRC3BQ96PB8 259 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 WDR83Q9BRX9 315 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 PABPC3Q9H361 631 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 LRRC4CQ9HCJ2 640 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
SPTAN1-211ENST00000625980 MYO9BQ13459 2157 aa13.15□□□□□ -0.31
SPTAN1-211ENST00000625980 HELZP42694 1942 aaKnown RBP13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 SMAPO00193 183 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 RIPK2O43353 540 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 LUC7L3O95232 432 aaKnown RBP13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 MZF1P28698 734 aaPredicted RBP13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 ETFBP38117 255 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 LMAN1P49257 510 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 IL10RBQ08334 325 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 ADAM15Q13444 863 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 SLC29A2Q14542 456 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 MPPE1Q53F39 396 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 CENPUQ71F23 418 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.31
SPTAN1-211ENST00000625980 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms