RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FGFR3P22607 806 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 PDE1BQ01064 536 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 DBN1Q16643 649 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 PIK3R6Q5UE93 754 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 TTC9BQ8N6N2 239 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 ATP2A3Q93084 1043 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 MFSD3Q96ES6 412 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 ZNF419Q96HQ0 510 aaPredicted RBP20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 C7orf26Q96N11 449 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 KCNK13Q9HB14 408 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 GLOD4Q9HC38 313 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 TOP3BO95985 862 aaKnown RBP20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 ALDH2P05091 517 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 DLDP09622 509 aaKnown RBP20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 KCNJ2P63252 427 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 TMPRSS15P98073 1019 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 BST1Q10588 318 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 TIGD7Q6NT04 549 aaPredicted RBP20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 PARP9Q8IXQ6 854 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 FAM126BQ8IXS8 530 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 RBBP8Q99708 897 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 MARCH5Q9NX47 278 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 MPP6Q9NZW5 540 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 DCDC2Q9UHG0 476 aa20.1■□□□□ 0.81
PCDHB11-202ENST00000624887 NYNRINQ9P2P1 1898 aaKnown RBP20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 A0A0G2JND7 137 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 ANXA9O76027 345 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 ARFIP2P53365 341 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 TBX4P57082 545 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 CHI3L2Q15782 390 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 SMAD1Q15797 465 aaKnown RBP20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 TEDDM1Q5T9Z0 273 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 SPATA22Q8NHS9 363 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 ISL2Q96A47 359 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 CHRAC1Q9NRG0 131 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 CLIC5Q9NZA1 410 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 EMCNQ9ULC0 261 aa20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 MTO1Q9Y2Z2 717 aaKnown RBP20.09■□□□□ 0.81
PCDHB11-202ENST00000624887 GSRP00390 522 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 TPH1P17752 444 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 YWHAQP27348 245 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 SPRP35270 261 aaPredicted RBP20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 GATMP50440 423 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 OCRLQ01968 901 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 INSCQ1MX18 579 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 STRA8Q7Z7C7 330 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 ZNF683Q8IZ20 524 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 B3GALT6Q96L58 329 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 PPP1R2P1Q96PQ5 205 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 KIFC1Q9BW19 673 aa20.08■□□□□ 0.81
PCDHB11-202ENST00000624887 RTN3O95197 1032 aaPredicted RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 MAGEA12P43365 314 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 SLC11A1P49279 550 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 PAPOLAP51003 745 aaKnown RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 LIMK2P53671 638 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 N4BP2L1Q5TBK1 243 aaPredicted RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 CES4AQ5XG92 561 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 FAM43BQ6ZT52 329 aaPredicted RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 MTDHQ86UE4 582 aaKnown RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 KCNMB4Q86W47 210 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 GPR152Q8TDT2 470 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 SEPT8Q92599 483 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 FBXO32Q969P5 355 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 AGAP2Q99490 1192 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 TBL1YQ9BQ87 522 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 PAK6Q9NQU5 681 aaPredicted RBP20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 ZFP69BQ9UJL9 534 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 TRIM33Q9UPN9 1127 aa20.08■□□□□ 0.8
PCDHB11-202ENST00000624887 FNDC1Q4ZHG4 1894 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 PLIN3O60664 434 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 SNNO75324 88 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 MT-CYBP00156 380 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 TYK2P29597 1187 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 PSEN1P49768 467 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 GEMP55040 296 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 GPR17Q13304 367 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 HSP90AA5PQ58FG0 334 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 FUT10Q6P4F1 479 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 CLNKQ7Z7G1 428 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 KIF2BQ8N4N8 673 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 DCLK2Q8N568 766 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 SPPL2BQ8TCT7 592 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 TMEM120AQ9BXJ8 343 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 NOL6Q9H6R4 1146 aaKnown RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 PRDM5Q9NQX1 630 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 OLA1Q9NTK5 396 aaKnown RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 PPARGC1AQ9UBK2 798 aaKnown RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 LRFN2Q9ULH4 789 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 MAGED2Q9UNF1 606 aaPredicted RBP20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 DOCK4Q8N1I0 1966 aa20.07■□□□□ 0.8
PCDHB11-202ENST00000624887 MTMR11A4FU01 709 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 PITPNM1O00562 1244 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 TBC1D4O60343 1298 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 HLA-DQB2P05538 268 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 T-ENOLP0DO92 83 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 CPB1P15086 417 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 RHOQP17081 205 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 NMBRP28336 390 aa20.06■□□□□ 0.8
PCDHB11-202ENST00000624887 ARPP19P56211 112 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms