RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	NELFB	Q8WX92	580 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	HTR3C	Q8WXA8	447 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	TMA16	Q96EY4	203 aa	Known RBP	10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	EEF2KMT	Q96G04	330 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	FAXDC2	Q96IV6	333 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	MRGPRX3	Q96LB0	322 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	MYOC	Q99972	504 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	DUSP23	Q9BVJ7	150 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	NUP62CL	Q9H1M0	184 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ADNP	Q9H2P0	1102 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	TMEM8A	Q9HCN3	771 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ACSL6	Q9UKU0	697 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	PCDHGA7	Q9Y5G6	932 aa		10.66	□□□□□ -0.7
RRP12-215	ENST00000622320	ITIH6	Q6UXX5	1313 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	EDDM13	A0A1B0GTR0	161 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CPED1	A4D0V7	1026 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	NEMP2	A6NFY4	417 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TTC34	A8MYJ7	566 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	GOLGA6L22	H0YM25	854 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	SCAMP1	O15126	338 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	RTN2	O75298	545 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	NEBL	O76041	1014 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	IL1B	P01584	269 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	HLA-DRA	P01903	254 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TRIM49	P0CI25	452 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TRIM49C	P0CI26	452 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	LIPC	P11150	499 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	KRT13	P13646	458 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	MZF1	P28698	734 aa	Predicted RBP	10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CSK	P41240	450 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	METAP1	P53582	386 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CYP4F2	P78329	520 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	PAK1	Q13153	545 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	BIRC3	Q13489	604 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	MANEA	Q5SRI9	462 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	KRT39	Q6A163	491 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CRYBG2	Q8N1P7	616 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	STK40	Q8N2I9	435 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TMEM145	Q8NBT3	493 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TPCN2	Q8NHX9	752 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	TAS1R2	Q8TE23	839 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	SLC35C1	Q96A29	364 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	FAM131C	Q96AQ9	280 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	FAM129B	Q96TA1	746 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	CALN1	Q9BXU9	219 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	KDM4C	Q9H3R0	1056 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	METTL14	Q9HCE5	456 aa	Known RBP	10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	RWDD2A	Q9UIY3	292 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	STOML2	Q9UJZ1	356 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	USP3	Q9Y6I4	520 aa		10.65	□□□□□ -0.7
RRP12-215	ENST00000622320	LRRK1	Q38SD2	2015 aa		10.65	□□□□□ -0.71
RRP12-215	ENST00000622320	SCN8A	Q9UQD0	1980 aa		10.65	□□□□□ -0.71
RRP12-215	ENST00000622320	TARSL2	A2RTX5	802 aa	Known RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	PLD2	O14939	933 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	SLC7A4	O43246	635 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	PLRG1	O43660	514 aa	Known RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	STX10	O60499	249 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	TBL1X	O60907	577 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	LATS1	O95835	1130 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	MBD3	O95983	291 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	PRLR	P16471	622 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	TRIM21	P19474	475 aa	Known RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	WT1	P19544	449 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	GCLM	P48507	274 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	YWHAG	P61981	247 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	DRAP1	Q14919	205 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	NCAPH	Q15003	741 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	PERM1	Q5SV97	790 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	UNC93A	Q86WB7	457 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	MFN1	Q8IWA4	741 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	TRIM59	Q8IWR1	403 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ARHGAP18	Q8N392	663 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ZNF557	Q8N988	423 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	KDM1B	Q8NB78	822 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ZSCAN1	Q8NBB4	408 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	OR13H1	Q8NG92	308 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	TTC17	Q96AE7	1141 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	SYNDIG1	Q9H7V2	258 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	NCKIPSD	Q9NZQ3	722 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	ANAPC2	Q9UJX6	822 aa		10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	INTS6	Q9UL03	887 aa	Known RBP	10.64	□□□□□ -0.71
RRP12-215	ENST00000622320	EME2	A4GXA9	379 aa	Predicted RBP	10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	CASC3	O15234	703 aa	Known RBP	10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	GNA14	O95837	355 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	P4HA1	P13674	534 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	ERCC5	P28715	1186 aa	Predicted RBP	10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	CTSO	P43234	321 aa	Predicted RBP	10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	ASPA	P45381	313 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	KCNAB2	Q13303	367 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	SPIDR	Q14159	915 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	ELAVL3	Q14576	367 aa	Known RBP	10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	CBWD6	Q4V339	395 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	CBWD3	Q5JTY5	395 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	CBWD5	Q5RIA9	395 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	MPP7	Q5T2T1	576 aa		10.63	□□□□□ -0.71
RRP12-215	ENST00000622320	ADGRF1	Q5T601	910 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms