RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 DTLQ9NZJ0 730 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 HEY1Q9Y5J3 304 aa13.96□□□□□ -0.17
NEK3-210ENST00000620675 K7ERQ8 282 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 CBX4O00257 560 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ALADP13716 330 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 DRD1P21728 446 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 PAFAH1B3Q15102 231 aaKnown RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 KCTD19Q17RG1 926 aaPredicted RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 IL31Q6EBC2 164 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 CCDC117Q8IWD4 279 aaPredicted RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 SHDQ96IW2 340 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 MRGPRX3Q96LB0 322 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ACE2Q9BYF1 805 aaPredicted RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 CACNA2D2Q9NY47 1150 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 KMT2EQ8IZD2 1858 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 EML5Q05BV3 1969 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 APOL1O14791 398 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ZNF185O15231 689 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 SMAD6O43541 496 aaKnown RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 HLA-EP13747 358 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 VAV1P15498 845 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 PLK1P53350 603 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 SERINC3Q13530 473 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 NYAP1Q6ZVC0 841 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ALLCQ8N6M5 410 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 TTC17Q96AE7 1141 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 MSANTD3Q96H12 275 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 ZNF419Q96HQ0 510 aaPredicted RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 MAK16Q9BXY0 300 aaKnown RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 MAGEH1Q9H213 219 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 MFSD1Q9H3U5 465 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 C10orf88Q9H8K7 445 aa13.95□□□□□ -0.18
NEK3-210ENST00000620675 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
NEK3-210ENST00000620675 DOCK9Q9BZ29 2069 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 ADAM23O75077 832 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 HNRNPLP14866 589 aaKnown RBP eCLIP13.94□□□□□ -0.182e-21■■□□□ 11.7
NEK3-210ENST00000620675 POLR2EP19388 210 aaKnown RBP13.94□□□□□ -0.18
NEK3-210ENST00000620675 IL12RB1P42701 662 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 NDST2P52849 883 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 ZNF234Q14588 700 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 ZNF513Q8N8E2 541 aaPredicted RBP13.94□□□□□ -0.18
NEK3-210ENST00000620675 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 RPLP0P6Q8NHW5 317 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.94□□□□□ -0.18
NEK3-210ENST00000620675 LGMNQ99538 433 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 CACNA1HO95180 2353 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 TNFRSF4P43489 277 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 ECT2LQ008S8 904 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
NEK3-210ENST00000620675 SYT10Q6XYQ8 523 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 BBS12Q6ZW61 710 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 DCAF4L2Q8NA75 395 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 WFIKKN2Q8TEU8 576 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 CARD9Q9H257 536 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 ERVW-1Q9UQF0 538 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 STARD13Q9Y3M8 1113 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 SIT1Q9Y3P8 196 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 RAD54BQ9Y620 910 aa13.94□□□□□ -0.18
NEK3-210ENST00000620675 TTC34A8MYJ7 566 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 SGK1O00141 431 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 DLDP09622 509 aaKnown RBP13.93□□□□□ -0.18
NEK3-210ENST00000620675 PRKCHP24723 683 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 PTPN7P35236 360 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 YBEYP58557 167 aaPredicted RBP13.93□□□□□ -0.18
NEK3-210ENST00000620675 COPS2P61201 443 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 PARP15Q460N3 678 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 SUGP1Q8IWZ8 645 aaKnown RBP13.93□□□□□ -0.18
NEK3-210ENST00000620675 TXNDC5Q8NBS9 432 aaKnown RBP13.93□□□□□ -0.18
NEK3-210ENST00000620675 OSBPL9Q96SU4 736 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 RETREG1Q9H6L5 497 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 PDFQ9HBH1 243 aa13.93□□□□□ -0.18
NEK3-210ENST00000620675 THAP10Q9P2Z0 257 aaPredicted RBP13.93□□□□□ -0.18
NEK3-210ENST00000620675 KDELR3O43731 214 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 CEP104O60308 925 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 MAFKO60675 156 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 PEX11BO96011 259 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 NRLP54845 237 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 OXCT1P55809 520 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 ETF1P62495 437 aaKnown RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 GALNT2Q10471 571 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
NEK3-210ENST00000620675 ACTL9Q8TC94 416 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 PBXIP1Q96AQ6 731 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 CLDN23Q96B33 292 aa13.92□□□□□ -0.18
NEK3-210ENST00000620675 OLFM3Q96PB7 478 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms