RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 DESP17661 470 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 IL4RP24394 825 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CDC25BP30305 580 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 OXTRP30559 389 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 MAN1A1P33908 653 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 ACVRL1P37023 503 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 TPMTP51580 245 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 ARSEP51690 589 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 YBEYP58557 167 aaPredicted RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 ST8SIA6P61647 398 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 KRT83P78385 493 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 DPYSQ14117 519 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CSRP2Q16527 193 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 BOLA3Q53S33 107 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 SCYL2Q6P3W7 929 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 SLC36A4Q6YBV0 504 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 USP30Q70CQ3 517 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 H2AFVQ71UI9 128 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CEP68Q76N32 757 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 PLPP6Q8IY26 295 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CCDC170Q8IYT3 715 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 ZNF366Q8N895 744 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CADM4Q8NFZ8 388 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 OR7D4Q8NG98 312 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 RLN3Q8WXF3 142 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 TSC1Q92574 1164 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 PRCCQ92733 491 aaPredicted RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 SIPA1Q96FS4 1042 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 RPL10LQ96L21 214 aaKnown RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 EPAS1Q99814 870 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 ANP32EQ9BTT0 268 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 CEP44Q9C0F1 390 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 PCED1AQ9H1Q7 454 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 MTG2Q9H4K7 406 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 LRRC19Q9H756 370 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 WSB2Q9NYS7 404 aaPredicted RBP8.45□□□□□ -1.06
NEK3-209ENST00000618856 BCCIPQ9P287 314 aaKnown RBP eCLIP8.45□□□□□ -1.06
NEK3-209ENST00000618856 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 AP4E1Q9UPM8 1137 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 SPAG17Q6Q759 2223 aa8.45□□□□□ -1.06
NEK3-209ENST00000618856 K7ERQ8 282 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 MYO1FO00160 1098 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 MCF2LO15068 1137 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 SMAD6O43541 496 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 KDELR3O43731 214 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 AKR1B10O60218 316 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PRPSAP2O60256 369 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 FOXD2O60548 495 aaPredicted RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 VAV1P15498 845 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 GLDCP23378 1020 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 EPHB2P29323 1055 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 CD6P30203 668 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 HOXD12P35452 270 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ETFBP38117 255 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PTGER3P43115 390 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 NDST2P52849 883 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ELAVL3Q14576 367 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 DLG2Q15700 870 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ELF2Q15723 593 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 PARP15Q460N3 678 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 DAB2IPQ5VWQ8 1189 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ZNF776Q68DI1 518 aaPredicted RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 TXNRD3NBQ6F5E7 133 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 RWDD4Q6NW29 188 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 PRR23BQ6ZRT6 265 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 RFX8Q6ZV50 586 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 LPCAT2Q7L5N7 544 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 POLNQ7Z5Q5 900 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 TMEM139Q8IV31 216 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ARHGAP12Q8IWW6 846 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PGBD3Q8N328 593 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 OR2A12Q8NGT7 310 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ZNF564Q8TBZ8 553 aaPredicted RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 CTNNBL1Q8WYA6 563 aaPredicted RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 DNASE2BQ8WZ79 361 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ISG20Q96AZ6 181 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 BTBD6Q96KE9 485 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PABPC3Q9H361 631 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 CATSPERBQ9H7T0 1116 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PDFQ9HBH1 243 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 SPTLC3Q9NUV7 552 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 CWC15Q9P013 229 aaKnown RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 RCOR3Q9P2K3 495 aaPredicted RBP8.44□□□□□ -1.06
NEK3-209ENST00000618856 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ANAPC7Q9UJX3 599 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 RAB23Q9ULC3 237 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 INVSQ9Y283 1065 aa8.44□□□□□ -1.06
NEK3-209ENST00000618856 ZSCAN5CA6NGD5 496 aaPredicted RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 ZBTB24O43167 697 aaPredicted RBP8.43□□□□□ -1.06
NEK3-209ENST00000618856 RAMP2O60895 175 aa8.43□□□□□ -1.06
NEK3-209ENST00000618856 ADH1BP00325 375 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms