RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MAGEB3O15480 346 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 AVPR1AP37288 418 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 MAGEA10P43363 369 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ASPHQ12797 758 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ITGA7Q13683 1181 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC25A52Q3SY17 297 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 MGAT5BQ3V5L5 792 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 MMEL1Q495T6 779 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 CERCAMQ5T4B2 595 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 CRYBG2Q8N1P7 616 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ZNF669Q96BR6 464 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 OLFM3Q96PB7 478 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 POPDC2Q9HBU9 364 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC7A8Q9UHI5 535 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 ATP11BQ9Y2G3 1177 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 COMMD3-BMI1R4GMX3 469 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 MYOCOSA0A1B0GUC4 107 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 PMPCBO75439 489 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 GATMP50440 423 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 GALK1P51570 392 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 AQP4P55087 323 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 CDC42EP1Q00587 391 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 DLG1Q12959 904 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 KCNJ11Q14654 390 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 CHI3L2Q15782 390 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 NT5DC4Q86YG4 428 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 THEM5Q8N1Q8 247 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 PPP2R3CQ969Q6 453 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 PLEKHG4BQ96PX9 1271 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 KCNK13Q9HB14 408 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 HMX1Q9NP08 348 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 MTO1Q9Y2Z2 717 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 TRPV2Q9Y5S1 764 aa14.78□□□□□ -0.04
SHROOM1-208ENST00000617339 SPECC1L-ADORA2AF8WAN1 911 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 KRT37O76014 449 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 ITGA2BP08514 1039 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 SETSIPP0DME0 302 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 PNPLA4P41247 253 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC25A3Q00325 362 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 UBAP2LQ14157 1087 aaKnown RBP14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 DLG2Q15700 870 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 SLC39A12Q504Y0 691 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 HSP90AA5PQ58FG0 334 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 SPATA2LQ8IUW3 424 aaPredicted RBP14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 MAF1Q9H063 256 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 SYBUQ9NX95 663 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 RNF186Q9NXI6 227 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 PACSIN3Q9UKS6 424 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 TEX264Q9Y6I9 313 aa14.77□□□□□ -0.04
SHROOM1-208ENST00000617339 LYPLA1O75608 230 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 LTFP02788 710 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 GLRBP48167 497 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 SEPT6Q14141 434 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ACAP1Q15027 740 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 TRIP10Q15642 601 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 RBM44Q6ZP01 1051 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ZNF567Q8N184 647 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ATAD1Q8NBU5 361 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ZMIZ2Q8NF64 920 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 IPMKQ8NFU5 416 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 OR6Y1Q8NGX8 325 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 SKA1Q96BD8 255 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 TUBB6Q9BUF5 446 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 PHACTR1Q9C0D0 580 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 SENP1Q9P0U3 644 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 FIS1Q9Y3D6 152 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ZBTB24O43167 697 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 NOS2P35228 1153 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 ADRA1BP35368 520 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 OVOS1Q6IE37 1185 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 TTC39CQ8N584 583 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 AGAP2Q99490 1192 aa14.77□□□□□ -0.05
SHROOM1-208ENST00000617339 CCL22O00626 93 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 PEX2P28328 305 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ETFBP38117 255 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 CXCR3P49682 368 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 COG7P83436 770 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 SLC26A11Q86WA9 606 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 NUDCD3Q8IVD9 361 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 PCSK9Q8NBP7 692 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 PIP4K2CQ8TBX8 421 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 GCNAQ96QF7 691 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ZNF670Q9BS34 389 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 GTF2IRD1Q9UHL9 959 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ZNF711Q9Y462 761 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 DUSP11O75319 330 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 FYNP06241 537 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 TGM2P21980 687 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ACADSBP45954 432 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 POU6F1Q14863 301 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ARHGEF6Q15052 776 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms