RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 FNTAP49354 379 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 CDH4P55283 916 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 MTA1Q13330 715 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 PRKD1Q15139 912 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 MPPE1Q53F39 396 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 RABGAP1LQ5R372 815 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 LY6G5CQ5SRR4 150 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 ACBD5Q5T8D3 534 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 RHBDF2Q6PJF5 856 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 MAMSTRQ6ZN01 415 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 CHST9Q7L1S5 443 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 C12orf40Q86WS4 652 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 YAF2Q8IY57 180 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 TTC13Q8NBP0 860 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 MNS1Q8NEH6 495 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 CSGALNACT1Q8TDX6 532 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 OSCP1Q8WVF1 389 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 TMA16Q96EY4 203 aaKnown RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 ALG14Q96F25 216 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 HMCESQ96FZ2 354 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 MSANTD3Q96H12 275 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 ZNF419Q96HQ0 510 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 LMLNQ96KR4 655 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 LGMNQ99538 433 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 FAM83CQ9BQN1 747 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 TMEM121Q9BTD3 319 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 SEMA4AQ9H3S1 761 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 PRDM16Q9HAZ2 1276 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 USP29Q9HBJ7 922 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 SPHK2Q9NRA0 654 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 SPATA6Q9NWH7 488 aaPredicted RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 PCYOX1Q9UHG3 505 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 AMACRQ9UHK6 382 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 DMGDHQ9UI17 866 aaKnown RBP8.23□□□□□ -1.09
PCDH9-205ENST00000614931 FBXO4Q9UKT5 387 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 NEU2Q9Y3R4 380 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 ACTL7AQ9Y615 435 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 PIAS3Q9Y6X2 628 aa8.23□□□□□ -1.09
PCDH9-205ENST00000614931 A0A0D9SEW6 157 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 GOLGA6L10A0A0M3HER8 536 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 DFFAO00273 331 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 MCF2LO15068 1137 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TRIM24O15164 1050 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CLDN11O75508 207 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 PEX11BO96011 259 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 RHOCP08134 193 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 ZSCAN5DPP0CG00 497 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 GLDCP23378 1020 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CHRNA3P32297 505 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 SERPINB6P35237 376 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CHKAP35790 457 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 GARSP41250 739 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 IFNAR2P48551 515 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 NR2C2P49116 596 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 PAPOLAP51003 745 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 SLC7A5Q01650 507 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TNK2Q07912 1038 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 PPIDQ08752 370 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 LMAN2Q12907 356 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 XRCC4Q13426 336 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 BYSLQ13895 437 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 DHCR24Q15392 516 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TRADDQ15628 312 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 ZNF528Q3MIS6 628 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 SLC45A4Q5BKX6 768 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TTC39BQ5VTQ0 682 aaPredicted RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 NAIF1Q69YI7 327 aaPredicted RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 ADGRG2Q8IZP9 1017 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CARNMT1Q8N4J0 409 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 LZTR1Q8N653 840 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 ALLCQ8N6M5 410 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 MYRIPQ8NFW9 859 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 DDI1Q8WTU0 396 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 SLCO2A1Q92959 643 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 ARHGEF2Q92974 986 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CHFRQ96EP1 664 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 HINFPQ9BQA5 517 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 FRMD8P1Q9BZ68 369 aaPredicted RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 CHRDQ9H2X0 955 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 EBF3Q9H4W6 596 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 C8orf33Q9H7E9 229 aaPredicted RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 THG1LQ9NWX6 298 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 DUS2Q9NX74 493 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TBC1D14Q9P2M4 693 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 INTS6Q9UL03 887 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 DRG1Q9Y295 367 aaKnown RBP8.22□□□□□ -1.09
PCDH9-205ENST00000614931 TBC1D30Q9Y2I9 924 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 OR51B4Q9Y5P0 310 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 FANCMQ8IYD8 2048 aa8.22□□□□□ -1.09
PCDH9-205ENST00000614931 BCLAF3A2AJT9 711 aaKnown RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 EFCAB8A8MWE9 144 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 HACD1B0YJ81 288 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms