RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SLCO3A1Q9UIG8 710 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 FZD4Q9ULV1 537 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 LNP1A1A4G5 178 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 METTL12A8MUP2 240 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 ATP9BO43861 1147 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 GDF9O60383 454 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 GJB6O95452 261 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 EPHB2P29323 1055 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 HTR7P34969 479 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 HDAC4P56524 1084 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 GNA12Q03113 381 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 DLG2Q15700 870 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 C9orf64Q5T6V5 341 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 PEAR1Q5VY43 1037 aaPredicted RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 TRNP1Q6NT89 227 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 ZNF571Q7Z3V5 609 aaPredicted RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 SH2D3CQ8N5H7 860 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 TCEAL3Q969E4 200 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 MYO19Q96H55 970 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 PPP1R16AQ96I34 528 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 MYO1AQ9UBC5 1043 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 HS3ST2Q9Y278 367 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 SNX10Q9Y5X0 201 aa12.63□□□□□ -0.39
CBWD3-208ENST00000612050 TNRC6BQ9UPQ9 1833 aaKnown RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
CBWD3-208ENST00000612050 A0A1W2PP55 124 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MID1O15344 667 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 FGF10O15520 208 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 DAPK3O43293 454 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 CREB3O43889 395 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 PRPSAP2O60256 369 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 RAMP2O60895 175 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 FSBPO95073 299 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 PRNPP04156 253 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SKILP12757 684 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 GOT1P17174 413 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ENGP17813 658 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 L1CAMP32004 1257 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MAPK8P45983 427 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 NUMBP49757 651 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ZNF135P52742 658 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 IRX4P78413 519 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SCAPQ12770 1279 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 UAP1L1Q3KQV9 507 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 IL27RAQ6UWB1 636 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 PTPRN2Q92932 1015 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 XPO4Q9C0E2 1151 aaKnown RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MAGEH1Q9H213 219 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SLC32A1Q9H598 525 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 TMPRSS4Q9NRS4 437 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 VPS51Q9UID3 782 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 DOCK4Q8N1I0 1966 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 CXorf51AA0A1B0GTR3 108 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 C4orf47A7E2U8 309 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 PATE3B3GLJ2 98 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MCF2LO15068 1137 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SLC7A4O43246 635 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 OPHN1O60890 802 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 LRIG2O94898 1065 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ACSL1P33121 698 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 DNA2P51530 1060 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 IRAK1P51617 712 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 TPI1P60174 286 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MAMLD1Q13495 774 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ACAP1Q15027 740 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 SH3PXD2AQ5TCZ1 1133 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 PLEKHA7Q6IQ23 1121 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 Q6ZVU0 165 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ZNF683Q8IZ20 524 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
CBWD3-208ENST00000612050 CCDC185Q8N715 623 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 OR2T34Q8NGX1 318 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 FNIP1Q8TF40 1166 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 ALG14Q96F25 216 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 KDM4CQ9H3R0 1056 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 TMEM74BQ9NUR3 256 aa12.62□□□□□ -0.39
CBWD3-208ENST00000612050 TAS2R14Q9NYV8 317 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms