RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ATP9BO43861 1147 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
CTSA-210ENST00000606000 KCNK5O95279 499 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 IL1BP01584 269 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 IGHV4-34P06331 123 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 CTSLP07711 333 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 ADRB1P08588 477 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 DRD3P35462 400 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 NNMTP40261 264 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 PBX1P40424 430 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 NOVA1P51513 510 aaKnown RBP12.6□□□□□ -0.39
CTSA-210ENST00000606000 OXCT1P55809 520 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 ELAVL3Q14576 367 aaKnown RBP12.6□□□□□ -0.39
CTSA-210ENST00000606000 DLG2Q15700 870 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 DAB2IPQ5VWQ8 1189 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 RWDD4Q6NW29 188 aaKnown RBP12.6□□□□□ -0.39
CTSA-210ENST00000606000 NCEH1Q6PIU2 408 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 SETD3Q86TU7 594 aaPredicted RBP12.6□□□□□ -0.39
CTSA-210ENST00000606000 HDDC3Q8N4P3 179 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 DCAF4L2Q8NA75 395 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 DEFB124Q8NES8 71 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 C1orf216Q8TAB5 229 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 ORAI3Q9BRQ5 295 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 EBF2Q9HAK2 575 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 IL21RQ9HBE5 538 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 OR12D3Q9UGF7 316 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 MYO6Q9UM54 1294 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 WDR87Q6ZQQ6 2873 aa12.6□□□□□ -0.39
CTSA-210ENST00000606000 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 CBX4O00257 560 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 BCAT2O15382 392 aaPredicted RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 LRIG2O94898 1065 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 GNSP15586 552 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ACVRL1P37023 503 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 ATXN3P54252 364 aaPredicted RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 GALCP54803 685 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ADPRHP54922 357 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 PPP2CBP62714 309 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 PPP2CAP67775 309 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ARF5P84085 180 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ZNF252P-AS1Q0IIN9 211 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 C6orf118Q5T5N4 469 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 N4BP2L1Q5TBK1 243 aaPredicted RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 KIAA0895LQ68EN5 471 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 SCYL2Q6P3W7 929 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 USP30Q70CQ3 517 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ATP11CQ8NB49 1132 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 OMDQ99983 421 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 SPON2Q9BUD6 331 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 ATP13A1Q9HD20 1204 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 AIPL1Q9NZN9 384 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 PPARGC1AQ9UBK2 798 aaKnown RBP12.59□□□□□ -0.39
CTSA-210ENST00000606000 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 DNAI1Q9UI46 699 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 SCML1Q9UN30 329 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 HS3ST2Q9Y278 367 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 LAMA1P25391 3075 aa12.59□□□□□ -0.39
CTSA-210ENST00000606000 CHD5Q8TDI0 1954 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 A0A1B0GVT2 93 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 WNT9AO14904 365 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 RTN2O75298 545 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 CD160O95971 181 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 ADH1BP00325 375 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 PLEKP08567 350 aaPredicted RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 C5AR1P21730 350 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 PRKCIP41743 596 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 UBASH3AP57075 661 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 KRT83P78385 493 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 NRG1Q02297 640 aaPredicted RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 GNA12Q03113 381 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 ARL13BQ3SXY8 428 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 KCNT1Q5JUK3 1230 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 C22orf39Q6P5X5 142 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 DCUN1D2Q6PH85 259 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 LEKR1Q6ZMV7 388 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 RABEPKQ7Z6M1 372 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 SLFN11Q7Z7L1 901 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 OR2A12Q8NGT7 310 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 OR8D1Q8WZ84 308 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 NTAN1Q96AB6 310 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 TBC1D31Q96DN5 1066 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms