RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CHKAP35790 457 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 ACVRL1P37023 503 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 ADGRE1Q14246 886 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 ARHGAP15Q53QZ3 475 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 UBAP2Q5T6F2 1119 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 FBXW10Q5XX13 1052 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 RHBDF2Q6PJF5 856 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 EFHBQ8N7U6 833 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 LEMD2Q8NC56 503 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 ART4Q93070 314 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 DNAJC17Q9NVM6 304 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 MTRF1LQ9UGC7 380 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 EYSQ5T1H1 3165 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 CFAP69A5D8W1 941 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 DNALI1O14645 258 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 TBX10O75333 385 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 METTL18O95568 372 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 PAPOLAP51003 745 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 RNASEH2BQ5TBB1 312 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 SUGP1Q8IWZ8 645 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 UMODL1-AS1Q8N2C9 162 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 ATPAF2Q8N5M1 289 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 WFDC5Q8TCV5 224 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 DZANK1Q9NVP4 752 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 SH3BP1Q9Y3L3 701 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 HELZP42694 1942 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 C5orf42Q9H799 3197 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 RASA4BC9J798 803 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 RASA4O43374 803 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 MAFKO60675 156 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 TMEM63AO94886 807 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 PTPN3P26045 913 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 DDX6P26196 483 aaKnown RBP eCLIP17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 STIP1P31948 543 aaKnown RBP17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 SLC29A2Q14542 456 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 ICE2Q659A1 982 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 ANKRD54Q6NXT1 300 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 ELMSAN1Q6PJG2 1045 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 HTR3DQ70Z44 454 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 NPAS3Q8IXF0 933 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 FAM217AQ8IXS0 508 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 ZSCAN18Q8TBC5 510 aaPredicted RBP17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 MDM1Q8TC05 714 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 CPT1BQ92523 772 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 LRRC3BQ96PB8 259 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 XPO6Q96QU8 1125 aaKnown RBP17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 TMEM109Q9BVC6 243 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 SEMA4AQ9H3S1 761 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 CLEC1BQ9P126 229 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 WHRNQ9P202 907 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 RAD54BQ9Y620 910 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 DOCK4Q8N1I0 1966 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 TRIOBPQ9H2D6 2365 aa17.73■□□□□ 0.43
PPFIA3-207ENST00000602716 A0A0D9SEW6 157 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 MX2P20592 715 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 OR1E1P30953 314 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 MMP13P45452 471 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ACTN3Q08043 901 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 USP4Q13107 963 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ZNF77Q15935 545 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 LRIT3Q3SXY7 679 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 RABGAP1LQ5R372 815 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 HIBCHQ6NVY1 386 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 BZW1Q7L1Q6 419 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 GET4Q7L5D6 327 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ARID3BQ8IVW6 561 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ZNF567Q8N184 647 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 USP33Q8TEY7 942 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 SEC16BQ96JE7 1060 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 FAM129AQ9BZQ8 928 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 TDP1Q9NUW8 608 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 LSM7Q9UK45 103 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 A0A0A0MRY4 1105 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 J3KR12 359 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 TBL1XO60907 577 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 LATS1O95835 1130 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 PFKLP17858 780 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 DRD4P21917 467 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 HNRNPH1P31943 449 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 BASP1P80723 227 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 CALCOCO2Q13137 446 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 MTA1Q13330 715 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 MTM1Q13496 603 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ANKRD20A2Q5SQ80 823 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ANKRD20A1Q5TYW2 823 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 ANKRD20A3Q5VUR7 823 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 CXorf57Q6NSI4 855 aaKnown RBP17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 TMEM184AQ6ZMB5 413 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 GPR149Q86SP6 731 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 CROCCP2Q86T23 111 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 CCDC13Q8IYE1 715 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 LZTR1Q8N653 840 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 OR7D4Q8NG98 312 aa17.72■□□□□ 0.43
PPFIA3-207ENST00000602716 PPP2R3CQ969Q6 453 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms