RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PYROXD2Q8N2H3 581 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 NETO1Q8TDF5 533 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CPLX3Q8WVH0 158 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 ERLEC1Q96DZ1 483 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 TRIM11Q96F44 468 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 RPL10LQ96L21 214 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 EIF3CQ99613 913 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CAPN10Q9HC96 672 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 RXFP3Q9NSD7 469 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 ABHD10Q9NUJ1 306 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 TMEM74BQ9NUR3 256 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 PPM1HQ9ULR3 514 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SCML1Q9UN30 329 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CYP8B1Q9UNU6 501 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SCINQ9Y6U3 715 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 PLXNA2O75051 1894 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ANKRD62A6NC57 917 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TMCO5BA8MYB1 307 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ALOX15BO15296 676 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 GDF9O60383 454 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 SNAP91O60641 907 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 VAV1P15498 845 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TCF4P15884 667 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 GLDCP23378 1020 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 IL1R2P27930 398 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 MIPP30301 263 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 OXTRP30559 389 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 OR1E1P30953 314 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 DRD3P35462 400 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 DHPSP49366 369 aaPredicted RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 CLCN6P51797 869 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 GALCP54803 685 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ARF5P84085 180 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 FOXK2Q01167 660 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 SLC25A11Q02978 314 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 GNA12Q03113 381 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 SLC20A2Q08357 652 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ELAVL3Q14576 367 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 DPYSL2Q16555 572 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 CA9Q16790 459 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 DCUN1D2Q6PH85 259 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 SLC23A3Q6PIS1 610 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 DGLUCYQ7Z3D6 616 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TFAP2DQ7Z6R9 452 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TMEFF1Q8IYR6 380 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 RTL3Q8N8U3 475 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 C12orf50Q8NA57 414 aaPredicted RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 RNF214Q8ND24 703 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 OR7D4Q8NG98 312 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 OR2A12Q8NGT7 310 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TSC1Q92574 1164 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 PRCCQ92733 491 aaPredicted RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 ARHGEF2Q92974 986 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 ISG20Q96AZ6 181 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 ZNF653Q96CK0 615 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TBC1D31Q96DN5 1066 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 ARHGEF26Q96DR7 871 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 RTKNQ9BST9 563 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 C2orf49Q9BVC5 232 aaPredicted RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 THAP2Q9H0W7 228 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 RBSNQ9H1K0 784 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 MAGEH1Q9H213 219 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 PABPC3Q9H361 631 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 SMOC1Q9H4F8 434 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 LRRC19Q9H756 370 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 MRPL47Q9HD33 250 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 SEPT11Q9NVA2 429 aaKnown RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 SERGEFQ9UGK8 458 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 SARDHQ9UL12 918 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 TP53BP1Q12888 1972 aaPredicted RBP9□□□□□ -0.97
SSBP4-208ENST00000600628 FRYQ5TBA9 3013 aa9□□□□□ -0.97
SSBP4-208ENST00000600628 FREM2Q5SZK8 3169 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 LNP1A1A4G5 178 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 METTL12A8MUP2 240 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 K7ERQ8 282 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 CDX4O14627 284 aaPredicted RBP8.99□□□□□ -0.97
SSBP4-208ENST00000600628 SLC30A4O14863 429 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 KHNYNO15037 678 aaKnown RBP8.99□□□□□ -0.97
SSBP4-208ENST00000600628 SMAD6O43541 496 aaKnown RBP8.99□□□□□ -0.97
SSBP4-208ENST00000600628 SRGAP2O75044 1071 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 GJB3O75712 270 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 MTA2O94776 668 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 LCA5LO95447 670 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 CTSLP07711 333 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 RHOCP08134 193 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 ITPKAP23677 461 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 ACSL1P33121 698 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 DPP6P42658 865 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 ARSEP51690 589 aa8.99□□□□□ -0.97
SSBP4-208ENST00000600628 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
SSBP4-208ENST00000600628 METAP1P53582 386 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms