RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RENBPP51606 427 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 IRAK1P51617 712 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 NSUN2Q08J23 767 aaKnown RBP eCLIP12.56□□□□□ -0.4
TGFB1-204ENST00000600196 CCINQ13939 588 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 LONRF2Q1L5Z9 754 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 CCDC181Q5TID7 509 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 MBLAC2Q68D91 279 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 C4orf22Q6V702 233 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 NAT16Q8N8M0 369 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 NKD2Q969F2 451 aaPredicted RBP12.56□□□□□ -0.4
TGFB1-204ENST00000600196 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 P2RY11Q96G91 374 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 PPP1R2P1Q96PQ5 205 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 KLHL11Q9NVR0 708 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 THAP10Q9P2Z0 257 aaPredicted RBP12.56□□□□□ -0.4
TGFB1-204ENST00000600196 SUN2Q9UH99 717 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 IPO11Q9UI26 975 aaKnown RBP12.56□□□□□ -0.4
TGFB1-204ENST00000600196 SLC25A13Q9UJS0 675 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 INTS6Q9UL03 887 aaKnown RBP12.56□□□□□ -0.4
TGFB1-204ENST00000600196 CLEC4EQ9ULY5 219 aa12.56□□□□□ -0.4
TGFB1-204ENST00000600196 COL4A2P08572 1712 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 BCLAF3A2AJT9 711 aaKnown RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 SHISA7A6NL88 538 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CCDC188H7C350 402 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 MCF2LO15068 1137 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 MATN3O15232 486 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 ATP9BO43861 1147 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 MAFKO60675 156 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CD70P32970 193 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 PAPOLAP51003 745 aaKnown RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 ST8SIA6P61647 398 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 GRM3Q14832 879 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 SDE2Q6IQ49 451 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 C12orf40Q86WS4 652 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CREG2Q8IUH2 290 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 ATPAF2Q8N5M1 289 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 TEX26Q8N6G2 289 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 NPWQ8N729 165 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 TFB1MQ8WVM0 346 aaKnown RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 MAML1Q92585 1016 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 C16orf45Q96MC5 204 aaPredicted RBP12.55□□□□□ -0.4
TGFB1-204ENST00000600196 PSMB7Q99436 277 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CD320Q9NPF0 282 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 TRHDEQ9UKU6 1024 aa12.55□□□□□ -0.4
TGFB1-204ENST00000600196 EYSQ5T1H1 3165 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 MYOFQ9NZM1 2061 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 A0A0D9SEW6 157 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 K7EQS6 105 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 ITGAVP06756 1048 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CHRNB1P11230 501 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 KIR2DL1P43626 348 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 MAPK8P45983 427 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CLCN5P51795 746 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 IFI35P80217 286 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 GBE1Q04446 702 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CKAP4Q07065 602 aaKnown RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 SLC10A2Q12908 348 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 PRKD1Q15139 912 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 FUT11Q495W5 492 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 KAZNQ674X7 775 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 FSTL4Q6MZW2 842 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 ZNF572Q7Z3I7 529 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CIR1Q86X95 450 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CDKL3Q8IVW4 592 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 PCDH20Q8N6Y1 951 aaKnown RBP12.54□□□□□ -0.4
TGFB1-204ENST00000600196 OR52K2Q8NGK3 314 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 BHMTQ93088 406 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 PSKH2Q96QS6 385 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 SPON2Q9BUD6 331 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 PDFQ9HBH1 243 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms