RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 COG7P83436 770 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 PPM1JQ5JR12 505 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 SPANXN3Q5MJ09 141 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 TIFABQ6ZNK6 161 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 KDELC2Q7Z4H8 507 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 CIR1Q86X95 450 aaPredicted RBP14.75□□□□□ -0.05
VRK3-217ENST00000599538 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
VRK3-217ENST00000599538 CDKL2Q92772 493 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 ATP2A3Q93084 1043 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 IGSF8Q969P0 613 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 C1orf74Q96LT6 269 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 GLOD4Q9HC38 313 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 CDY1Q9Y6F8 540 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 CCDC195A0A1B0GUA6 201 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 HAPLN1P10915 354 aaPredicted RBP14.75□□□□□ -0.05
VRK3-217ENST00000599538 NEFHP12036 1026 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 NCALDP61601 193 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 ZNF33AQ06730 810 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 BNIP1Q12981 228 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 PDE1CQ14123 709 aaPredicted RBP14.75□□□□□ -0.05
VRK3-217ENST00000599538 HSP90AA5PQ58FG0 334 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 C10orf120Q5SQS8 335 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 RAP1GAP2Q684P5 730 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 KLHDC8BQ8IXV7 354 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 IPMKQ8NFU5 416 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 TSSK1BQ9BXA7 367 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 VN1R3Q9BXE9 311 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 MYLK2Q9H1R3 596 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 SLC40A1Q9NP59 571 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
VRK3-217ENST00000599538 RBM22Q9NW64 420 aaKnown RBP eCLIP14.75□□□□□ -0.054e-6■■■■□ 24.3
VRK3-217ENST00000599538 MKS1Q9NXB0 559 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 EMCNQ9ULC0 261 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 TRIM33Q9UPN9 1127 aa14.75□□□□□ -0.05
VRK3-217ENST00000599538 MYLKQ15746 1914 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 C2orf71A6NGG8 1288 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 J3KR12 359 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 USP1O94782 785 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 PEX11BO96011 259 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 GSRP00390 522 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 CRHR1P34998 444 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 NRG1Q02297 640 aaPredicted RBP14.74□□□□□ -0.05
VRK3-217ENST00000599538 TEDDM1Q5T9Z0 273 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 DENND5AQ6IQ26 1287 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 FBXL22Q6P050 247 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 TMCO2Q7Z6W1 182 aaPredicted RBP14.74□□□□□ -0.05
VRK3-217ENST00000599538 CMC1Q7Z7K0 106 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 CNPY4Q8N129 248 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 LZTR1Q8N653 840 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 ACVR1CQ8NER5 493 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 SPPL2BQ8TCT7 592 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 HMCESQ96FZ2 354 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 TTPALQ9BTX7 342 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 C20orf27Q9GZN8 174 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 MARCH2Q9P0N8 246 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
VRK3-217ENST00000599538 USH1CQ9Y6N9 552 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 SLC12A8A0AV02 714 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 DNAJC8O75937 253 aaPredicted RBP14.74□□□□□ -0.05
VRK3-217ENST00000599538 GSTA1P08263 222 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 HTR7P34969 479 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 PGGT1BP53609 377 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 PRMT2P55345 433 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 CDH17Q12864 832 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 ERP27Q96DN0 273 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 VWCEQ96DN2 955 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 KLHL5Q96PQ7 755 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 FCRL5Q96RD9 977 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 RNF208Q9H0X6 261 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 ECT2Q9H8V3 914 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 ZNF358Q9NW07 568 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 CLIC5Q9NZA1 410 aa14.74□□□□□ -0.05
VRK3-217ENST00000599538 FAM237BA0A1B0GVD1 139 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 TTC24A2A3L6 582 aaPredicted RBP14.73□□□□□ -0.05
VRK3-217ENST00000599538 WASH4PA8MWX3 477 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 C2CD2LO14523 706 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 PMPCBO75439 489 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 ZNF189O75820 626 aaPredicted RBP14.73□□□□□ -0.05
VRK3-217ENST00000599538 RASSF9O75901 435 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 PRKCGP05129 697 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 CNTFP26441 200 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 GP5P40197 560 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 CHRNA4P43681 627 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 NPY2RP49146 381 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 KCNQ1P51787 676 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 MAXP61244 160 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 PRPSAP1Q14558 356 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 IHHQ14623 411 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 POU6F1Q14863 301 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 TRIP4Q15650 581 aaPredicted RBP14.73□□□□□ -0.05
VRK3-217ENST00000599538 NAPEPLDQ6IQ20 393 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 ZCCHC23Q6ZST2 131 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 STRA8Q7Z7C7 330 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 ARHGAP18Q8N392 663 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 FBXO22Q8NEZ5 403 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 APBB2Q92870 758 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 FICDQ9BVA6 458 aa14.73□□□□□ -0.05
VRK3-217ENST00000599538 IL22Q9GZX6 179 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms