RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MAPK13O15264 365 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 IRAK2O43187 625 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 RNGTTO60942 597 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 GADD45BO75293 160 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 IGLV3-27P01718 113 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 NUDT1P36639 197 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 GCLMP48507 274 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 RAD23BP54727 409 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 CYP4F2P78329 520 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 ADIGQ0VDE8 80 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 CDH18Q13634 790 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 ELAVL3Q14576 367 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 IGFBP7Q16270 282 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 COBLL1Q53SF7 1204 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 PERM1Q5SV97 790 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 RNF219Q5W0B1 726 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 RBM44Q6ZP01 1051 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 PTRH1Q86Y79 214 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 HJURPQ8NCD3 748 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 WDR36Q8NI36 951 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 TMC2Q8TDI7 906 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 NUCKS1Q9H1E3 243 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 MMRN2Q9H8L6 949 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 LRRC4Q9HBW1 653 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 CHMP5Q9NZZ3 219 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 SEPT3Q9UH03 358 aa14.17□□□□□ -0.14
SHKBP1-208ENST00000595726 A0A1W2PQU0 124 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 NEMP2A6NFY4 417 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 PIK3R2O00459 728 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 SMC2O95347 1197 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 TRIM49P0CI25 452 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 TRIM49CP0CI26 452 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 SLC5A2P31639 672 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 PRCPP42785 496 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 TBR1Q16650 682 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 GOLGA7BQ2TAP0 167 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 EDRF1Q3B7T1 1238 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 XKR5Q6UX68 686 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 ELOA2Q8IYF1 753 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 FRS2Q8WU20 508 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 ABCC13Q9NSE7 274 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 HOOK1Q9UJC3 728 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 CREBBPQ92793 2442 aa14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 ANKRD17O75179 2603 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-208ENST00000595726 LRBAP50851 2863 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 IKBKBO14920 756 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 SLC7A4O43246 635 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 GABBR2O75899 941 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 MOCS3O95396 460 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 ITGB2P05107 769 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 LCP1P13796 627 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 RPL13P26373 211 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 VAMP7P51809 220 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 PDX1P52945 283 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 TBX4P57082 545 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 CLCA4Q14CN2 919 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 ZNF284Q2VY69 593 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 DEFB133Q30KQ1 61 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 ARHGAP17Q68EM7 881 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 Q6ZSR6 202 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 INTS8Q75QN2 995 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 UNC45BQ8IWX7 931 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 ZNF557Q8N988 423 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 GRAMD1AQ96CP6 724 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 SEMA3CQ99985 751 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 IMPG2Q9BZV3 1241 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 USP29Q9HBJ7 922 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 CISHQ9NSE2 258 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 XPO7Q9UIA9 1087 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 KLF15Q9UIH9 416 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 MAN2B2Q9Y2E5 1009 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 PAXBP1Q9Y5B6 917 aa14.15□□□□□ -0.14
SHKBP1-208ENST00000595726 EME2A4GXA9 379 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 XPO1O14980 1071 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 MUSKO15146 869 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 WT1P19544 449 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 PSMC2P35998 433 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 SLC8A3P57103 927 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ENPEPQ07075 957 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ADAM9Q13443 819 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 SKIDA1Q1XH10 827 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ACCSLQ4AC99 568 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 MS4A13Q5J8X5 152 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ZCCHC8Q6NZY4 707 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 MSANTD2Q6P1R3 559 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 GCNT7Q6ZNI0 430 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms