RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SH2D3CQ8N5H7 860 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 OR2T3Q8NH03 318 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 FRS2Q8WU20 508 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 HMCESQ96FZ2 354 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 CELF6Q96J87 481 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 PPP1R9BQ96SB3 815 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 DESI2Q9BSY9 194 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 C2orf49Q9BVC5 232 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 KLC2Q9H0B6 622 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 EPC1Q9H2F5 836 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 GOLPH3Q9H4A6 298 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 CATSPERBQ9H7T0 1116 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 PRDM16Q9HAZ2 1276 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 MBD1Q9UIS9 605 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 CYP8B1Q9UNU6 501 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 SMG5Q9UPR3 1016 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 DOCK9Q9BZ29 2069 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 A0A0U1RQJ8 604 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 EDDM13A0A1B0GTR0 161 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 PRR23AA6NEV1 266 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 WASH4PA8MWX3 477 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 FGF10O15520 208 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 RAMP2O60895 175 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 ERCC2P18074 760 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 AMPD1P23109 780 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 MAN1A1P33908 653 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 RPS14P62263 151 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 KRT83P78385 493 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 DPYSQ14117 519 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 POLD3Q15054 466 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 DLG2Q15700 870 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 USP39Q53GS9 565 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 BOLA3Q53S33 107 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 C9orf64Q5T6V5 341 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 Q6ZVU0 165 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 PSTKQ8IV42 348 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 TP53INP2Q8IXH6 220 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 STK40Q8N2I9 435 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 NPWQ8N729 165 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 KDM1BQ8NB78 822 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 PTPRN2Q92932 1015 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 SUN2Q9UH99 717 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 HS3ST2Q9Y278 367 aa14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 TP53BP1Q12888 1972 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-207ENST00000595631 USP34Q70CQ2 3546 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 GOLGA6L3A6NEY3 463 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 GOLGA6L6A8MZA4 724 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 RASA4BC9J798 803 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 H3BRJ5 948 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ZBTB24O43167 697 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 DAPK3O43293 454 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 RASA4O43374 803 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ATP9BO43861 1147 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 BNIP3LO60238 219 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 CD160O95971 181 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 LMNAP02545 664 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 TNNT1P13805 278 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 HTR7P34969 479 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 CNR2P34972 360 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 NNMTP40261 264 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 P2RY2P41231 377 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ARSEP51690 589 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 CDH6P55285 790 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 KRT81Q14533 505 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 TCEAL1Q15170 157 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 HADHQ16836 314 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 POLNQ7Z5Q5 900 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ZNF354CQ86Y25 554 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 DEFB119Q8N690 84 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 TSC1Q92574 1164 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 PRCCQ92733 491 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 SIPA1Q96FS4 1042 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 CSPG4P5Q96PW8 444 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 SLC39A8Q9C0K1 460 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 MAGEH1Q9H213 219 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 TNKS2Q9H2K2 1166 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 RETREG1Q9H6L5 497 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ETNK2Q9NVF9 386 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 FCF1Q9Y324 198 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 DUSP10Q9Y6W6 482 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 PLXNA2O75051 1894 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 ADAMTS9Q9P2N4 1935 aa14.09□□□□□ -0.15
SHKBP1-207ENST00000595631 IGHV1OR15-9A0A0B4J2B8 117 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 TARSL2A2RTX5 802 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 BUB1O43683 1085 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 BUB1BO60566 1050 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 COMTP21964 271 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 ARL4AP40617 200 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 ARHGAP25P42331 645 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 PSMD8P48556 350 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 HCAR3P49019 387 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 MRE11P49959 708 aa14.08□□□□□ -0.16
SHKBP1-207ENST00000595631 SERPINH1P50454 418 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms