RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ELOVL4Q9GZR5 314 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 FAM53CQ9NYF3 392 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 TAS2R14Q9NYV8 317 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 NXF1Q9UBU9 619 aaKnown RBP13.29□□□□□ -0.28
SCAF1-202ENST00000595242 CLCA2Q9UQC9 943 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
SCAF1-202ENST00000595242 CLDN5O00501 218 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 TSPAN3O60637 253 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 FTCDO95954 541 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ASS1P00966 412 aaKnown RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ITGAVP06756 1048 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 TMEM191BP0C7N4 346 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 CD27P26842 260 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 GNL1P36915 607 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 C21orf59P57076 290 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 BIRC3Q13489 604 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 CUL2Q13617 745 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 GEN1Q17RS7 908 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 CACTIN-AS1Q8N1I8 211 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 UCMAQ8WVF2 138 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 HES6Q96HZ4 224 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 PBKQ96KB5 322 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ELF4Q99607 663 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 KLF16Q9BXK1 252 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ACE2Q9BYF1 805 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 TRIM4Q9C037 500 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 THAP2Q9H0W7 228 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 SNX25Q9H3E2 840 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 APOBEC3GQ9HC16 384 aaKnown RBP13.28□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 FBXO10Q9UK96 956 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 SLC27A6Q9Y2P4 619 aa13.28□□□□□ -0.28
SCAF1-202ENST00000595242 VILLO15195 856 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 TLR5O60602 858 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 FSBPO95073 299 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 SEMA4FO95754 770 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 CYP1A2P05177 515 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 EPHX1P07099 455 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 MMEP08473 750 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 ZDHHC11BP0C7U3 371 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 PTPN1P18031 435 aaKnown RBP13.27□□□□□ -0.29
SCAF1-202ENST00000595242 PRKCHP24723 683 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 MCM3P25205 808 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 PAFAH1B1P43034 410 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 NOP2P46087 812 aaKnown RBP13.27□□□□□ -0.29
SCAF1-202ENST00000595242 VAC14Q08AM6 782 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 ILKQ13418 452 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 NCOA4Q13772 614 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 ZNF234Q14588 700 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 RPS6KA1Q15418 735 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 DCBLD1Q8N8Z6 715 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 SAP25Q8TEE9 199 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 TAF4BQ92750 862 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 P2RY11Q96G91 374 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 HIC2Q96JB3 615 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-202ENST00000595242 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
SCAF1-202ENST00000595242 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 B3GNT5Q9BYG0 378 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 IGSF5Q9NSI5 407 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 LSM7Q9UK45 103 aaKnown RBP13.27□□□□□ -0.29
SCAF1-202ENST00000595242 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
SCAF1-202ENST00000595242 BUB1BO60566 1050 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 TBX18O95935 607 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 CYP1A1P04798 512 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 USP8P40818 1118 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 PGFP49763 221 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 BCAT1P54687 386 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 INSM1Q01101 510 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 SHBQ15464 509 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 DUOXA2Q1HG44 320 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 ACAD10Q6JQN1 1059 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 TRIM72Q6ZMU5 477 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 DNAAF5Q86Y56 855 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 SNRNP27Q8WVK2 155 aaKnown RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 ANKRD36BP1Q96IX9 119 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 BTBD1Q9H0C5 482 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 SEPT11Q9NVA2 429 aaKnown RBP13.26□□□□□ -0.29
SCAF1-202ENST00000595242 IL37Q9NZH6 218 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 UVRAGQ9P2Y5 699 aa13.26□□□□□ -0.29
SCAF1-202ENST00000595242 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms