RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ELP4Q96EB1 424 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 ZNF845Q96IR2 970 aaPredicted RBP6.87□□□□□ -1.31
VMP1-215ENST00000592619 PDLIM2Q96JY6 352 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 CLIC5Q9NZA1 410 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 TFCP2L1Q9NZI6 479 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 HCN3Q9P1Z3 774 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 TBC1D14Q9P2M4 693 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 LRIT1Q9P2V4 623 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 KLQ9UEF7 1012 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
VMP1-215ENST00000592619 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 PTPRKQ15262 1439 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 PRYO14603 147 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 TNPO2O14787 897 aaKnown RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 FYB1O15117 783 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 SLC3A2P08195 630 aaKnown RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 ELFN1P0C7U0 828 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ATF7P17544 494 aaPredicted RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 PSMA4P25789 261 aaKnown RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 NDUFS1P28331 727 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 AVPR2P30518 371 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ADRA1BP35368 520 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 GGT5P36269 586 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 POLD2P49005 469 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 CCT8P50990 548 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 CTSWP56202 376 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 SLC37A1P57057 533 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ZNF766Q5HY98 468 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 FAM69AQ5T7M9 428 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ADGRG6Q86SQ4 1221 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 SCN4BQ8IWT1 228 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ADGRF3Q8IZF5 1079 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 TERB1Q8NA31 727 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 MAFAQ8NHW3 353 aaPredicted RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 ACTRT2Q8TDY3 377 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 SLC9A6Q92581 669 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 BARD1Q99728 777 aaKnown RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 SEZ6LQ9BYH1 1024 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 CIPCQ9C0C6 399 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ALDH8A1Q9H2A2 487 aaPredicted RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 MROH8Q9H579 483 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ALKBH4Q9NXW9 302 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 TAS2R10Q9NYW0 307 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 ODF2LQ9ULJ1 636 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 REXO2Q9Y3B8 237 aaKnown RBP6.86□□□□□ -1.31
VMP1-215ENST00000592619 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 UNC13BO14795 1591 aa6.86□□□□□ -1.31
VMP1-215ENST00000592619 FSD2A1L4K1 749 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 A6NCN8 305 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 C1QTNF3-AMACRE9PGA6 284 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 CLIC1O00299 241 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 GFPT2O94808 682 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 RPN1P04843 607 aaKnown RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 LYL1P12980 280 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 EPHA8P29322 1005 aaPredicted RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 ZNF84P51523 738 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 CDH15P55291 814 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 ARHGAP8P85298 464 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 MFSD13AQ14CX5 517 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 GLE1Q53GS7 698 aaKnown RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 Q6YL49 198 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 DIS3L2Q8IYB7 885 aaKnown RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 NGEFQ8N5V2 710 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 TNIP2Q8NFZ5 429 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 KCNJ9Q92806 393 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 CYP4F11Q9HBI6 524 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 VEZTQ9HBM0 779 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 SEMA4BQ9NPR2 832 aaPredicted RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 ASIC5Q9NY37 505 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 FOXJ2Q9P0K8 574 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 OSGIN2Q9Y236 505 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 SIRT4Q9Y6E7 314 aaPredicted RBP6.85□□□□□ -1.31
VMP1-215ENST00000592619 VWDEQ8N2E2 1590 aa6.85□□□□□ -1.31
VMP1-215ENST00000592619 ANKRD50Q9ULJ7 1429 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 CEP152O94986 1710 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 PREX1Q8TCU6 1659 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 CAMSAP1Q5T5Y3 1602 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 SPATA31A5Q5VU36 1347 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 SPATA31A6Q5VVP1 1343 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 SPATA31A7Q8IWB4 1347 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 KDM3AQ9Y4C1 1321 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 TEX22C9J3V5 150 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 HMMRO75330 724 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 ALDOCP09972 364 aaKnown RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 CYP4B1P13584 511 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 HOXB9P17482 250 aaPredicted RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 DRD4P21917 467 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 HNF1BP35680 557 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 ARL1P40616 181 aaPredicted RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 LSM12Q3MHD2 195 aaKnown RBP6.84□□□□□ -1.31
VMP1-215ENST00000592619 MTFR2Q6P444 385 aa6.84□□□□□ -1.31
VMP1-215ENST00000592619 C16orf54Q6UWD8 224 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms