RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 RGS18Q9NS28 235 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TK2O00142 265 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 BCL10O95999 233 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 OR1D2P34982 312 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 SETMARQ53H47 684 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 CYP4Z2PQ8N1L4 340 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 NINJ2Q9NZG7 142 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TOPAZ1Q8N9V7 1692 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 FZD9O00144 591 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 PDE2AO00408 941 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KRT6AP02538 564 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KRT6BP04259 564 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KRT6CP48668 564 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 PLEKHA7Q6IQ23 1121 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 CEP68Q76N32 757 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 CXorf40AQ8TE69 158 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 MYLPFQ96A32 169 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TRUB2O95900 331 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 OR56A5P0C7T3 313 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 GPC1P35052 558 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 TALDO1P37837 337 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 CDK16Q00536 496 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 KCNK18Q7Z418 384 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
SMARCA4-216ENST00000591545 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 LYPLA2O95372 231 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 CYP2A7P20853 494 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 SKP1P63208 163 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 XRCC4Q13426 336 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 MTSS1LQ765P7 747 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 DHFR2Q86XF0 187 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 HJURPQ8NCD3 748 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 GDPD5Q8WTR4 605 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 DERAQ9Y315 318 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 NALCNQ8IZF0 1738 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 MGAT4DA6NG13 374 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 RPL21P46778 160 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 GLRBP48167 497 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 CRHR2Q13324 411 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 FAM46CQ5VWP2 391 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 POLR1EQ9GZS1 481 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 POLE3Q9NRF9 147 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 ZNF510Q9Y2H8 683 aa13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-216ENST00000591545 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 FAM47E-STBD1D6RA91 191 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 LDLRP01130 860 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 ME2P23368 584 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 SMG7Q92540 1137 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 C9orf16Q9BUW7 83 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 KCNK4Q9NYG8 393 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 UBP1Q9NZI7 540 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 PNMA8CA0A1B0GUJ8 204 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 ADH1CP00326 375 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 TSHRP16473 764 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 AMPD1P23109 780 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 TTKP33981 857 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 ELK3P41970 407 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 MMP13P45452 471 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 SMAD3P84022 425 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 CSHL1Q14406 222 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 CBWD3Q5JTY5 395 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 CBWD5Q5RIA9 395 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 TCP10LQ8TDR4 215 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 PANX3Q96QZ0 392 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 ZDHHC6Q9H6R6 413 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 CAPN10Q9HC96 672 aa13.52□□□□□ -0.25
SMARCA4-216ENST00000591545 F8VP50 259 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 EID3Q8N140 333 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 ZCCHC9Q8N567 271 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 ATG16L2Q8NAA4 619 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 UGT2B28Q9BY64 529 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 CYP4F12Q9HCS2 524 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 CACNA1FO60840 1977 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 GPR25O00155 361 aa13.51□□□□□ -0.25
SMARCA4-216ENST00000591545 GABRR2P28476 465 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms